Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0864 ATGGCCGAAGCTAGGAACAGTGGCGAATCCACCAAGGGCGGTGGAGATAGCCAGTATTGGGAGATTGAAAGGGGTAAAGATCTCGATTTTAGCAGCGAGAGGCGACAAGAGAAGCCAGTTTTTGATGACGCTTCATTGTCACCGAGGCCTCTCAAGAAGATCCGAAGCCCTCCACACTATAACCCAAATCAGTTTCAATCCTCTGTTTCCATGCCTCCTCCTTCCTCCTCTGTTCCCTCTTCTTCTTCCTCACGAATCGTGTTCCCTTTCTCCTTCGATGGCTCTCAACAATATCCCCAGCAATTCGGAACCCCAAATTCGCCTGTGTTTCGTCCTCCCTTTAATCATCAGCAGCAGATGATATCTTTCGGGCCCCAACAGCAGAACATTGGGTACCCACCATTTTTGTCTCAAGATTATGCAGTTCCGCAGCAGCAGCAGCAGCTTCTTCAGTATTGTTGGAGGGATACATTGAATCTGAGTCCAAGAGGAAGGATGATGATGATGAACAGAGTAGGGGCTGATGGGAGGCCGTTGTATAGACCACCGGTTCAGCCCTTGAACACCACGAAGCTGTACAGGGGAGTGAGGCAACGCCACTGGGGGAAATGGGTGGCTGAGATCCGTCTTCCTCGCAACAGGACTCGTCTCTGGCTTGGCACTTTCGACACAGCAGAAGATGCTGCCTTGGCTTATGATCGTGAAGCCTTTAAGCTGAGAGGAGAGAATGCTAGGCTCAATTTCCCTGAACTCTTTCTCAATAAGGATAACAAACCACCTTCAACAGCTCCAGATTCAGCTGCATCTTCTCCCTCAACCCCCCATGAAGCATCAACTTCTACTTCGAAGCCACCCGAGTCAGCTACGATCACCGAGGAGGCACCGCCACCGGAGGAGAACACCGACAATGACTCGGGAATTGGGTCCAGTGACGCTGCTATGAGTGATGAAGCTCAAGCAGGTGCAGGTGGTGGGGGTGTAACAGGGGAAGGCATTTCGACGTCGCAGGAATTGGCTTGGGGTGAAATGCAAGCTTGGTTCAATGCAATTCCAGCAGGTTGGGGTCCAGGTAGCCCTGTGTGGGACGATTTAGACACCAACAATAATCTTCTCTTTCACTCACACCTTCCCTTCGTCAATCCAAATCAGCAAGAATTTAACAATCCAGATAGACCACAAGAAGATACCCCAGAACCAGGTTCTTCCACTTCCTCCTCTTGTCCCATGAGACCTTTCTTCTGGAAGGGTCAAGATTGA 1257 0.5044 MAEARNSGESTKGGGDSQYWEIERGKDLDFSSERRQEKPVFDDASLSPRPLKKIRSPPHYNPNQFQSSVSMPPPSSSVPSSSSSRIVFPFSFDGSQQYPQQFGTPNSPVFRPPFNHQQQMISFGPQQQNIGYPPFLSQDYAVPQQQQQLLQYCWRDTLNLSPRGRMMMMNRVGADGRPLYRPPVQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDNKPPSTAPDSAASSPSTPHEASTSTSKPPESATITEEAPPPEENTDNDSGIGSSDAAMSDEAQAGAGGGGVTGEGISTSQELAWGEMQAWFNAIPAGWGPGSPVWDDLDTNNNLLFHSHLPFVNPNQQEFNNPDRPQEDTPEPGSSTSSSCPMRPFFWKGQD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0864 418 MobiDBLite consensus disorder prediction 259 288 - -
Bisa12g0864 418 MobiDBLite consensus disorder prediction 379 410 - -
Bisa12g0864 418 CDD AP2 191 251 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 MobiDBLite consensus disorder prediction 59 83 - -
Bisa12g0864 418 ProSiteProfiles AP2/ERF domain profile. 192 249 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 Gene3D AP2/ERF domain 192 250 IPR036955 GO:0003700|GO:0006355
Bisa12g0864 418 PRINTS Ethylene responsive element binding protein signature 193 204 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 PRINTS Ethylene responsive element binding protein signature 215 231 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 MobiDBLite consensus disorder prediction 1 83 - -
Bisa12g0864 418 MobiDBLite consensus disorder prediction 252 332 - -
Bisa12g0864 418 SUPERFAMILY DNA-binding domain 192 250 IPR016177 GO:0003677
Bisa12g0864 418 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 364 - -
Bisa12g0864 418 FunFam Ethylene-responsive transcription factor 2 191 250 - -
Bisa12g0864 418 SMART rav1_2 192 255 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 Pfam AP2 domain 193 241 IPR001471 GO:0003700|GO:0006355
Bisa12g0864 418 MobiDBLite consensus disorder prediction 19 42 - -
Bisa12g0864 418 MobiDBLite consensus disorder prediction 379 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0864 Bisa-ChrBisa12 14152165 14153421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0864 1 363 AP2-EREBP Transcription Factor Family AT2G20880 45.845 3.39e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa12g0864 AP2 3e-13 CL0081