Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0855 ATGATCCACTTCCGTGTGAAACGACCGACACACCCTTCGGGTTTCTCCCTAAAAGGAAAAAGAGGACCCAAGCACGACAGAGTCACAAATGCAGATTTAACGCCTCAGGCGCGGATTGGGCCCACTGCTCTCAGTGGCAGATTCTCTTCTGCCGCCATCAAACTGTCGGCAACGCTCCACTCCCAACTGTTTTCTCGGTTTCCCCGCTCAAGGCAGCCGAGTTTCAGACTTCTAGCGGCGGCGCGTTCCCTCCACAGCACAATGTACCACCGCCTTGGCTCCTCCGTACTGTTTTTAAGCCTCTGCTTTCGCTTGGTGTCGAATGCTCCTCCAGCACGGGCTCAGGCGGAGCTTCAGCACCACCGGGACTCACTCCTGGACCTACATTGGAAACCGGGCACCGCCACCTGGTACGGCGACCCCGAAGGCGACGGCAGCACCGGGGGGGCATGTGGGTACGGAAGCTTGGTGGACGTGAAGCCGTGGAGGGCACGGGTGGGGGCGGTGGGGCCGGTGCTGTTCATGGCCGGCGAAGGGTGTGGGGCGTGCTATAAGGTCAAGTGCTTGGACGAGAGCATATGCTCGAGGCGAGCCGTGACGGTGATTATAACTGACGAGTGTCCAGGGTGCCCCACCGACCAAACCCACTTCGACCTCAGTGGCGCGGCGTTTGGGCGCATGGCTATCGCCGGCGAGCACGGTCAACTCAGGGATCGAGGTCAAATCCCGGTCATTTACCGACGAACACCGTGTAAATATCCAGGTAGAAACATTGCCTTCCATGTGAACGAAGGATCCACACCTTTTTGGGTTTCACTTTTGGTGGAGTTTGAAGATGGAGAAGGAGACATCAGCTCCATGCATATTCGAGAAGCAGGGTCTGTAGAGTGGCTACAGATGAACCATCTATGGGGTGCAAATTGGTGCATTATTGGTGGACCTTTGAGGGGACCGTTCTCAGTGAAACTAAGCACATCCTCTGGAAGATCTCTGTCAGCCAGAGATGTTATTCCAGGCAATTGGTCTCCAAAAGCCACTTACACATCTCGCCTCAATTTCTACCCTTAG 1068 0.5599 MIHFRVKRPTHPSGFSLKGKRGPKHDRVTNADLTPQARIGPTALSGRFSSAAIKLSATLHSQLFSRFPRSRQPSFRLLAAARSLHSTMYHRLGSSVLFLSLCFRLVSNAPPARAQAELQHHRDSLLDLHWKPGTATWYGDPEGDGSTGGACGYGSLVDVKPWRARVGAVGPVLFMAGEGCGACYKVKCLDESICSRRAVTVIITDECPGCPTDQTHFDLSGAAFGRMAIAGEHGQLRDRGQIPVIYRRTPCKYPGRNIAFHVNEGSTPFWVSLLVEFEDGEGDISSMHIREAGSVEWLQMNHLWGANWCIIGGPLRGPFSVKLSTSSGRSLSARDVIPGNWSPKATYTSRLNFYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0855 355 MobiDBLite consensus disorder prediction 7 27 - -
Bisa12g0855 355 SMART dpbb_1 166 246 IPR007112 -
Bisa12g0855 355 FunFam Beta-expansin 3 253 354 - -
Bisa12g0855 355 SUPERFAMILY Barwin-like endoglucanases 129 255 IPR036908 -
Bisa12g0855 355 Gene3D - 252 350 IPR036749 -
Bisa12g0855 355 Gene3D - 116 251 IPR036908 -
Bisa12g0855 355 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 269 349 IPR007117 -
Bisa12g0855 355 PANTHER EXPANSIN-B3 106 353 - -
Bisa12g0855 355 Pfam Lytic transglycolase 171 245 IPR009009 -
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 239 255 IPR007118 GO:0005576
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 147 165 IPR007118 GO:0005576
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 170 188 IPR007118 GO:0005576
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 335 349 IPR007118 GO:0005576
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 129 144 IPR007118 GO:0005576
Bisa12g0855 355 PRINTS Expansin/Lol pI family signature 297 311 IPR007118 GO:0005576
Bisa12g0855 355 Pfam Expansin C-terminal domain 258 338 IPR007117 -
Bisa12g0855 355 PRINTS Major pollen allergen Lol pI signature 260 275 IPR005795 GO:0005576|GO:0019953
Bisa12g0855 355 PRINTS Major pollen allergen Lol pI signature 206 221 IPR005795 GO:0005576|GO:0019953
Bisa12g0855 355 PRINTS Major pollen allergen Lol pI signature 228 243 IPR005795 GO:0005576|GO:0019953
Bisa12g0855 355 PRINTS Major pollen allergen Lol pI signature 325 342 IPR005795 GO:0005576|GO:0019953
Bisa12g0855 355 PRINTS Major pollen allergen Lol pI signature 276 291 IPR005795 GO:0005576|GO:0019953
Bisa12g0855 355 FunFam Expansin B3 115 252 - -
Bisa12g0855 355 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 148 256 IPR007112 -
Bisa12g0855 355 SUPERFAMILY PHL pollen allergen 256 349 IPR036749 -
Bisa12g0855 355 CDD DPBB_EXPB_N 130 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0855 Bisa-ChrBisa12 14008123 14010569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0855 96 291 Expansin Gene Family AT4G28250 67.857 3.47e-91 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0855 12 14008123 14010569 Bisa12g0855 12 14008123 14010569 ECH