Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0841 ATGGAGCAGCCTTTGGTGAAAGGCGAGAGCAGTGGCCAGAGGAATCGACAGCGCGGGCGATACAATCGCTCACATGCAATCACTCACGGTTCGCCCTACGAGAAAGCAGCTGCACTTGTGGATCTGGCTGAAGATGGTGTTGGCATCCCAGAGCAAATCCTTCATTCATCGGGATTTCAAAGTTCTGCTAGATTTTATTTTGTGTATACTGAACTTAACTTTATATGGTCAATCAGTTATTTTGCCCTGCTAGTCCTAAATTTCCTTGAGAAACCTTTGTGGTGTGAAAAGTATACCTCATATTCTTGCAACGATAGAGAGTATTTCTTTCTCGGACAGTTGCCGTATCTAACTGGTGCCGAATGTCTTATTTATGAGGGAATAACTCTTGTTGTGCTTATCATACATACTTTTTTCCCAATATCATATGAAGGCTCCCGTATATATTGGAAAAATACGGTTAATAAATTGAAGGCCTTCTGTCTGTTAGTTTTGGTTGCTGATATGCTGGTTTATGCTCTGTATTTGTCTCCAGTGACTTTTTACTCTCTACCTGTCAGATTAGCACCTTATATCAGGGTTGCTCTTTTCATTTTGAATATTAGGGAACTACGAGCAAGCATCATCATCTTGGCTGGAATGCTTGACACGTACTTGAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAACAGTATTCACTTCATATGGTACCACGTTGTATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTCTGGATTCCTGCATACAGGGCTTCGCGTTGGTATTGCCTGTTTTTCATTCTCTTTGTGCTGTTGGGAGTTTACTTTGTTACGAACTTGGTCCTCGCCGTTGTCTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTCTGAGATGGATCGTATGAGAGGAAATATGTTGGACAAAGCATTTGATTTATTAGATGATAACCATGCTGGGTATCTTGACAAAGAACAATGCATTAAACTCTTTGTGGAGCTGAACAAGTACAGGACTTTGCCAAAGATCTCCATGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGATAGTCGTGATGTGAAGATCAGCAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAGTTCCAGAAGGAGGACATTCCATCTTACTTGGATTATTATTCATTCTACAATTCATCCATCTCCAAGAAGTTGAAAACCTTCGTGCGGAACCCGACGTTTGGATACATAATATCCTTCTTTCTTATACTGAATCTGGTTGCTGTTGTAATTGAGACAACGCTTGATGTAGAAAATAATTCTGCTCAGAAGGTGTGGCAAGAGGTTGAGTTTATTTTCGGGTGGATATATGTGGTAGAAATGGTTCTAAAAGTTTATTCATATGGATTCATGAACTATTGGCGGGATGGTCAAAACCGCTTTGATTTTATGATCACATGGATAATTGTCATTGGAGAAACTATAACTTTTGCTACACCTGATGGACTGGATTTTTTCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCCAGAATGTTGAGGTTAATAAGGCTCTTAATGCATGTCCAGCGATACCGAGCCTTTGTGGCAACCTTCCTAACCCTCATACCAAGTTTGATGCCATATCTCGGAACTATATTTTGTATCTTATGTATTTATTGCTCACTTGGTGTACAGATCTTTGGTGGAATTGTTAATGCTGGAAACCCCAAATTGGAAGCAACAGATCTTGCTGATGATGACTATATACTCTTTAATTTTAATGATTATCCAAATGGAATGGTGACGCTTTGGAATTTGTTAGTCATGGGGAACTGGCAAATATGGATGCAGAGCTACAAGGAATTGACAGGGACTTCTTGGACCTACCTGTACTTTGTTAGCTTCTATCTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACACCAGATACTAGTGAAGGACATGACAAGGAAGTTGAAGGAGAGAAGTATCGAAGAAGATATGTTGGCACAAAAACACGAAGCCAAAGGCTTTTGCAGGATGCGCTAAGGAGTCCATTTCATTATGTGAAGAATATACATATCTACGATGCGTTATAG 2208 0.3972 MEQPLVKGESSGQRNRQRGRYNRSHAITHGSPYEKAAALVDLAEDGVGIPEQILHSSGFQSSARFYFVYTELNFIWSISYFALLVLNFLEKPLWCEKYTSYSCNDREYFFLGQLPYLTGAECLIYEGITLVVLIIHTFFPISYEGSRIYWKNTVNKLKAFCLLVLVADMLVYALYLSPVTFYSLPVRLAPYIRVALFILNIRELRASIIILAGMLDTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKTVFTSYGTTLYQMFVLFTTSNNPDVWIPAYRASRWYCLFFILFVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDRMRGNMLDKAFDLLDDNHAGYLDKEQCIKLFVELNKYRTLPKISMEEFELIFDELDDSRDVKISKDEFADICNAIALKFQKEDIPSYLDYYSFYNSSISKKLKTFVRNPTFGYIISFFLILNLVAVVIETTLDVENNSAQKVWQEVEFIFGWIYVVEMVLKVYSYGFMNYWRDGQNRFDFMITWIIVIGETITFATPDGLDFFSNGEWIRYLLLARMLRLIRLLMHVQRYRAFVATFLTLIPSLMPYLGTIFCILCIYCSLGVQIFGGIVNAGNPKLEATDLADDDYILFNFNDYPNGMVTLWNLLVMGNWQIWMQSYKELTGTSWTYLYFVSFYLITVLLLLNLVVAFVLEAFFAEMELETPDTSEGHDKEVEGEKYRRRYVGTKTRSQRLLQDALRSPFHYVKNIHIYDAL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0841 735 Gene3D - 422 555 IPR027359 -
Bisa12g0841 735 FunFam Two pore calcium channel protein 1 203 314 - -
Bisa12g0841 735 Gene3D - 310 394 - -
Bisa12g0841 735 MobiDBLite consensus disorder prediction 1 17 - -
Bisa12g0841 735 SUPERFAMILY EF-hand 328 412 IPR011992 -
Bisa12g0841 735 FunFam Two pore calcium channel protein 1 556 713 - -
Bisa12g0841 735 SUPERFAMILY Voltage-gated potassium channels 431 676 - -
Bisa12g0841 735 Pfam Ion transport protein 431 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa12g0841 735 Pfam Ion transport protein 128 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa12g0841 735 Gene3D - 203 309 - -
Bisa12g0841 735 MobiDBLite consensus disorder prediction 1 21 - -
Bisa12g0841 735 FunFam Two pore calcium channel protein 1 423 555 - -
Bisa12g0841 735 ProSiteProfiles EF-hand calcium-binding domain profile. 324 359 IPR002048 GO:0005509
Bisa12g0841 735 Gene3D - 556 714 - -
Bisa12g0841 735 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 714 IPR044581 GO:0005245
Bisa12g0841 735 SMART efh_1 369 397 IPR002048 GO:0005509
Bisa12g0841 735 SMART efh_1 328 356 IPR002048 GO:0005509
Bisa12g0841 735 CDD EFh 328 393 IPR002048 GO:0005509
Bisa12g0841 735 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0841 1 722 Ion Channels AT4G03560 67.123 0.0 1037