Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0835 ATGGCTCCCCTTACCTCCTCCTTCTCCTTCTTCTTCCTTGCTCTTCTATGTTCAGTATCAGCAACTGAATTCGTATACAACAGGGACTTCAATTCTACCAACATCGTTCTCTTCGGCAATGCCACTATCCAAAACTCTGTTCTCACTCTCACCAACCAGACCTTCTACTCCACCGGTCGCGCCTTTTACCCTCACAGAATACGCATGAAATCATCAAACTCCTCCACCCCTCTTCCCTTCGCCACCTCCTTCCTCTTCTCCATCGCTCCCTGTGAGGACCTTCCCACGGGTCATGGATTCGCCTTTTTTCTCTCCCCTGTACTGCACATCGCCGGCGCAACATCGGGAGGCTATCTAGGTCTTTTCAATCGCACCAATGACGGTAAATCTTCCAACCATATTCTGGGTATTGAGTTTGATGATTTTAGGAACGTGGAATTCAACGAAATAAATGATAATCAAGTTGGTGTTGATATGAACTCGCTTATTTCGTTATATTCTCAAACTGCTGGGTTCTGGGGTGGGAGAAATGGGGATGAATTGGAGGAGTTGAGACTGGATAATGGGGAAAACTATCAAGTGTGGATTGAGTTTTTGGATTCACGGCTTAATGTTACTATGGCTGTAGCAGGAAAACGAAAGCCTCAAAGGCCTTTGATTAGTAAGCCTATTAACCTCTCTGATATTGTGTTCAATGACATGTATGTTGGCTTCTCTGGATCAACAGGGAAAATGGTAGACACATGTAGAATTCTGGCTTGGAGTTTTAGCACTTCAAATTTTTCAATTGGTGATGCTTTGTCTACGAGACATTTGCCCTTATATGTGCATTCAAAGATCAGATCAAAAGGGTTTATCATAGGTGTCACTTTGGGTGTCCTGATTGCTATATGTTGCTGCACTGTAATTTTCTTGAGTTTATCTAGAACCAGAAAGAAAGGGAAAGAGGATGAAGAGAATAATAACATTGAAGATTGGGAATTGGAGTATTGGCCACACAGGATTAGCTTCCAAGAGATTCATGATGCTACAATGGAGTTCTCTGAAGAGTGTGTGATTGGGAGTGGCACAAGTGGGACAGTATATAAAGGAGTTTTGCAAGGAGTAGAAGTTGCAGTGAAGAGAATCCCCCATGACACACAGCACGGGATGAGAGAGTTTCTGGCTGAGATTTCAAGCCTAGGCAGGATGAAACACAGGAACTTAGTGGGTTTCAGAGGCTGGTGTAAAAAAAAAGGAGGAAACTTGATTCTGGTTTATGATTACATGGAGAATGGAAGCTTGGACAAGAGGATTTTTGAGTGTGAAGAGAGCATGGTTTTGAGCTGGGAACAAAGAATAAGCGTTTTACAAAACGCAGCTTGCGGGATTTTATATCTTCATGAGGGTTGGGAAGTTGAAGTCTTACACAGAGACATCAAAGCAGGCAATGTTTTACTTGATAAAGATATGAATGCAAGACTTGGAGATTTTGGGCTAGCTAGATTGCTTCACCAAGAGCACTTGGCTGACACAACCAGAGTGATAGGGACTCTGGGGTATATGGCACCAGAACTAGTGCGAACCGGGCGGCCATCGAAAGCCACCGATGTGTACAGCTTTGGCATACTGGTTTTAGAAGTGGTTTGTGGGAGAAGACCTCTTGTGACAGATAAGCCAGCATTGATTGACTGGGTAGTGAACCTAATGGAGAGTGGAAACTTGTACAGTGCTGTTGACGAGCGTTTGAAGGCTCAAGGAGGGTTCAGCAATGAGGAAGTTGAGAAGGTGCTTCATTTGGGTTTGTTTTGTGCAGGTTCAGACCCGAAAGTTAGACCAACAATGCGGCAGGTGGTGAAGGTGTTGGAGAAAATTAAAGGGAATGCGTGTGAGGAGTGTTTTGATATGAACTTGGTTGAGAAGATAAACTCAGCAGCAATGTGGCATAGAGTGGCTTCGGATTCTACTGAAAAAAGTTATCCCACTTTTGAGGAAATTATGCAGTCCAAGTATTTTACCACAACCTCTCTAAGTGAGCCACAATCAGAGACAGGCTTCATTTCAGAAGGAAGGTGA 2055 0.4375 MAPLTSSFSFFFLALLCSVSATEFVYNRDFNSTNIVLFGNATIQNSVLTLTNQTFYSTGRAFYPHRIRMKSSNSSTPLPFATSFLFSIAPCEDLPTGHGFAFFLSPVLHIAGATSGGYLGLFNRTNDGKSSNHILGIEFDDFRNVEFNEINDNQVGVDMNSLISLYSQTAGFWGGRNGDELEELRLDNGENYQVWIEFLDSRLNVTMAVAGKRKPQRPLISKPINLSDIVFNDMYVGFSGSTGKMVDTCRILAWSFSTSNFSIGDALSTRHLPLYVHSKIRSKGFIIGVTLGVLIAICCCTVIFLSLSRTRKKGKEDEENNNIEDWELEYWPHRISFQEIHDATMEFSEECVIGSGTSGTVYKGVLQGVEVAVKRIPHDTQHGMREFLAEISSLGRMKHRNLVGFRGWCKKKGGNLILVYDYMENGSLDKRIFECEESMVLSWEQRISVLQNAACGILYLHEGWEVEVLHRDIKAGNVLLDKDMNARLGDFGLARLLHQEHLADTTRVIGTLGYMAPELVRTGRPSKATDVYSFGILVLEVVCGRRPLVTDKPALIDWVVNLMESGNLYSAVDERLKAQGGFSNEEVEKVLHLGLFCAGSDPKVRPTMRQVVKVLEKIKGNACEECFDMNLVEKINSAAMWHRVASDSTEKSYPTFEEIMQSKYFTTTSLSEPQSETGFISEGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0835 684 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Bisa12g0835 684 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Bisa12g0835 684 Gene3D - 20 269 - -
Bisa12g0835 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Bisa12g0835 684 FunFam L-type lectin-domain containing receptor kinase S.4 423 626 - -
Bisa12g0835 684 Gene3D Phosphorylase Kinase; domain 1 307 422 - -
Bisa12g0835 684 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 307 422 - -
Bisa12g0835 684 FunFam L-type lectin-domain containing receptor kinase V.9 20 266 - -
Bisa12g0835 684 SUPERFAMILY Protein kinase-like (PK-like) 321 616 IPR011009 -
Bisa12g0835 684 SMART serkin_6 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0835 684 CDD lectin_legume_LecRK_Arcelin_ConA 22 259 IPR001220 GO:0030246
Bisa12g0835 684 Pfam Legume lectin domain 22 260 IPR001220 GO:0030246
Bisa12g0835 684 ProSiteProfiles Protein kinase domain profile. 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0835 684 PANTHER - 39 617 - -
Bisa12g0835 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 259 IPR013320 -
Bisa12g0835 684 Pfam Protein kinase domain 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0835 684 CDD STKc_IRAK 353 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0835 Bisa-ChrBisa12 13598604 13600658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0835 19 564 Receptor kinase-like Gene Family AT4G04960 53.860 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa12g0835 Pkinase 8.3e-46 CL0016