Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0833 ATGAAAATGGAACAGCAAAGAAGTCAAGCTTCTTCTTCCACCAAGATCGAAAGAAGGCTCGTGGAGAAGAACAGAAGAAACCAGATGAAGATCCTCTACTCCGAACTGAACTCCCTCCTCCCAAACTTCAATCCCAAGGAAACGATTCCACTGCCTGATCAGATAGACGAGGCTATAAACTACATAAAGAGTTTAGAGGCAAAAGTGAAGGTGGCTGAGGAGAAGAAAGAGAGTTTATTAATGGAAAAGAAAAGGTCTCGTGCTTGCTGCAGCTCGAGTTGTTATGAGACAAAGGGACGCCTGAAATCGCCGCAAATAGAGATTCATGAAATGGGTTCGTCGCTACAAGTGATTCTGATAAGTGGGTTGGATAATCAGTTCATTTTCTCTGACATTATTCGCATACTGCATGAAGAGCACGTAGAGGTCTTAAGTGCCAATACCTCACTCACCCCAGATCATTCTATGCATCACATTGTGCATGCACAGATAGAGCCATCTTTGTTTCAATTCGGAGCTACCAAAGTAAGTGAGAGATTGAAAAGGTTTGTGTATGGATCCGCAAGTGATGTGGAGATACAGCCTGCTGACTTGTGGGATTTTCAAATTGGTACTGATACTTGGGATTTTTAA 633 0.4265 MKMEQQRSQASSSTKIERRLVEKNRRNQMKILYSELNSLLPNFNPKETIPLPDQIDEAINYIKSLEAKVKVAEEKKESLLMEKKRSRACCSSSCYETKGRLKSPQIEIHEMGSSLQVILISGLDNQFIFSDIIRILHEEHVEVLSANTSLTPDHSMHHIVHAQIEPSLFQFGATKVSERLKRFVYGSASDVEIQPADLWDFQIGTDTWDF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0833 210 FunFam Transcription factor bHLH162 6 91 - -
Bisa12g0833 210 MobiDBLite consensus disorder prediction 1 15 - -
Bisa12g0833 210 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0833 210 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 185 - -
Bisa12g0833 210 Pfam Helix-loop-helix DNA-binding domain 17 66 IPR011598 GO:0046983
Bisa12g0833 210 Gene3D - 3 92 IPR036638 GO:0046983
Bisa12g0833 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 65 IPR011598 GO:0046983
Bisa12g0833 210 Coils Coil 55 82 - -
Bisa12g0833 210 SMART finulus 19 71 IPR011598 GO:0046983
Bisa12g0833 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 85 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0833 Bisa-ChrBisa12 13501189 13502540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0833 3 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.683 6.11e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa12g0833 HLH 3.5e-06 No_clan