Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0813 ATGGTATGCTTGGGATTTGATATGGGCAACACTGAAAAATTGGATTCTTGGTTGATTAAGAGGAGGGGACTAGGGTTTGTATTCCAGATTGTATATGGGTGGTGGGTCGTTCTACTGTTCCTTCGCCCTGTGGCGGGTCTGAGACCATTAAGAGAGAGAACTCGGTCATGGGGCGATGAGTGGCTATTTTCAAGAAAAGAGGAAAGTGATCAATTTTCACAATGGAACATAACAGGAACTTACAGAGGGACCTGGAATTTTTTAGATACCACAAACAGTTCTTCCAGATTTTCAGACATCAGAAAAACAAATGGCAATTCTGTAATTGAATTATTTAGTACACGCACAAAAATAACTGGTGTGCATTATGTTCAGGGGGTAGTTATATTTCATGATGTGTTTGACAACGAATATAATGTTGGTGGTGCTCAAATCAGAGTAGAAGGTGTATATATATGGCCTTTTAAACAGCTTCGAATGGTAGCTAACAGTGGAAAAGAGAGAGAGTTGAATCAGGATGAAGACTATATATTATCTAATCCTTATCATCTGCTTGGAGTGTTCTCTTCTCAGGTATTTCAAGAATCTTCACGAGATAAGATGTGGAGAAGAAAACATTCACCAATATATGACATGGAGAAACACTGTAATATTGAAATTGCTGCACAGATGTCTCGCTTGTCATCATCAAATAACGATGGGGATCATGATCGTTTTCATCTGGAAGGGTTAATGGAGAGTCCCTCAGTGGATGGCGATGGGGACTGCTTCTCACCTTTAATGTTAAATGCAACCTCTGTTAACATTGAAGTCTACTATAACAAAGCTGTGAACTACACCTTGATGGTTACCTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAAATGGAGCATAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAATATTAATGATTGGCCAACAGGCTATAATGGATGCTTATCTCTGCCTTTTACATTTGACTGCAGGAATATTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTGGTATTCTCAATATTTGAGATGAGATATCTCCTTGCCATTTGGAAGGCAAGTAGACCTTTGAGTAATGGGGAAGGCTGGGAGACAATGAGGCGTGAGCTTTCAGTTTTATACAGTCGTTTCTATGGGATCCTGTTGGGAGGAATTCTGCTCATGTATGAATTCCATAATTATTTGAAACCTATTCTTCTTCTTATGTACTGTTTTTGGATACCTCAGATAGTCACCAATGTTATTCGTGATTCGCGCAAACCATTGCATCCTCATTATATATTAGGGATAACCATAACTCGGCTAGCAATCCCATTATATATATTTGGATGTCCCAACAACTTCATGCGCATTGAACCAGACAAGATCTGGTGTGTTTGTTTGGCCATATTTATTGGACTTCAGGCTGCAATTCTACTACTGCAGAACTATTTTGGGTCCCGCTGGTTCATTCCTCGTCAGATTCTTCCTGAGAAATACAGCTATTATAGGAGGTTTGGCCCAAATACACGTCATGCTACAGACTGTGTTATTTGCATGACGGCTGTTGATCTGACTCAGCGATCAAATGATTGCATGGTGACACCTTGTGAGCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCGACCTGCCGGCGGCCACTGCCACCGGCTTAG 1725 0.4046 MVCLGFDMGNTEKLDSWLIKRRGLGFVFQIVYGWWVVLLFLRPVAGLRPLRERTRSWGDEWLFSRKEESDQFSQWNITGTYRGTWNFLDTTNSSSRFSDIRKTNGNSVIELFSTRTKITGVHYVQGVVIFHDVFDNEYNVGGAQIRVEGVYIWPFKQLRMVANSGKERELNQDEDYILSNPYHLLGVFSSQVFQESSRDKMWRRKHSPIYDMEKHCNIEIAAQMSRLSSSNNDGDHDRFHLEGLMESPSVDGDGDCFSPLMLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHNYLKPILLLMYCFWIPQIVTNVIRDSRKPLHPHYILGITITRLAIPLYIFGCPNNFMRIEPDKIWCVCLAIFIGLQAAILLLQNYFGSRWFIPRQILPEKYSYYRRFGPNTRHATDCVICMTAVDLTQRSNDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRPLPPA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0813 574 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 515 574 IPR013083 -
Bisa12g0813 574 Pfam Ring finger domain 523 568 IPR001841 -
Bisa12g0813 574 SMART ring_2 524 567 IPR001841 -
Bisa12g0813 574 SMART ringv_2 523 568 IPR011016 GO:0008270
Bisa12g0813 574 CDD RING-H2_TUL1-like 518 573 - -
Bisa12g0813 574 FunFam E3 ubiquitin-protein ligase, putative 510 574 - -
Bisa12g0813 574 SUPERFAMILY RING/U-box 523 573 - -
Bisa12g0813 574 ProSiteProfiles Zinc finger RING-type profile. 524 568 IPR001841 -
Bisa12g0813 574 PANTHER RING ZINC FINGER PROTEIN 110 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0813 Bisa-ChrBisa12 13001527 13010496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0813 523 572 C3H Transcription Factor Family AT1G53010 35.294 3.08e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0813 12 13001527 13010496 Bisa12g0813 12 13001527 13010496 ECH