Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0807 ATGGATGGGGTTGAGCCGAAGACGGCTGTGACAAGGGAGGCCTCTGGGGATTACGGCGAGGACAAAAATGGGAACTCGGAGGAGGAGAGGAAGAAGAAAGGGGTGGGTGGTGGGTCCGCTAAGAAAGGGTCTGGTGGCGGCGGCGGAGGAAGCAGTATGCGGTGTTGCCAGGCGGAGAAGTGCGCGACGGAGCTTAGTGATGCCAAGCCGTATCATAGGAGGCACAAGGTGTGCGAATATCACGCCAAGGCTCAGGTAGTGATCGTGGCTGGCATACGACAGCGTTTTTGTCAGCAATGCAGCAGATTCCACGAGCTAGGAGAATTTGATGAGATGAAAAGGAGTTGCAGGCGTCGTTTGGCTGGGCACAACGAACGTCGAAGGAAGAGCTCAATGAATGAGTCACAAGAAGGGTCAAGCAGGAAAGGGATGAAGGGCAGTGAGGTGAAGGAGATAGGGTGTAGTGGGGAGGTTGACGAAAGGGGGAGAATGCAGATGACCATTCAAGAGAAACATTTCCAGATAAGGTGA 531 0.5405 MDGVEPKTAVTREASGDYGEDKNGNSEEERKKKGVGGGSAKKGSGGGGGGSSMRCCQAEKCATELSDAKPYHRRHKVCEYHAKAQVVIVAGIRQRFCQQCSRFHELGEFDEMKRSCRRRLAGHNERRRKSSMNESQEGSSRKGMKGSEVKEIGCSGEVDERGRMQMTIQEKHFQIR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0807 176 Gene3D - 46 117 IPR036893 GO:0003677|GO:0005634
Bisa12g0807 176 MobiDBLite consensus disorder prediction 14 36 - -
Bisa12g0807 176 MobiDBLite consensus disorder prediction 126 167 - -
Bisa12g0807 176 FunFam Squamosa promoter-binding-like protein 14 47 117 - -
Bisa12g0807 176 MobiDBLite consensus disorder prediction 1 52 - -
Bisa12g0807 176 ProSiteProfiles Zinc finger SBP-type profile. 53 130 IPR004333 GO:0003677
Bisa12g0807 176 SUPERFAMILY SBT domain 54 133 IPR036893 GO:0003677|GO:0005634
Bisa12g0807 176 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 133 IPR044817 GO:0003677
Bisa12g0807 176 Pfam SBP domain 56 129 IPR004333 GO:0003677
Bisa12g0807 176 MobiDBLite consensus disorder prediction 120 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0807 Bisa-ChrBisa12 12980011 12981800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0807 50 151 SBP-box Gene Family AT1G53160 63.107 2.15e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa12g0807 SBP 2.3e-31 No_clan