Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0796 ATGGCTTCGCTATTTAAGGATTTATCAAAGCTATCAGCATATCGAGATAGAAGGTTTGCTGGAACCCAAGAGGAATTTGAACATGCACTCGAGACATCAACCACTGTTTATATCGGCAACATGTCCTTTTACACAACAGAAGAGCAAGTTTACGAACTTTTTTCCCGAGCTGGAGAAATAAAGAAAATCATCATGGGATTGGATAAGAACACAAAAACACCCTGCGGCTTCTGTTTTGTTTTATATTACTCTCGTGAAGATACAGAGGATGCTGTCAAATACATAAGTGGAACAATACTTGATGACCGTCCTATCCGTGTGGATTTTGACTGGGGATTCCAGGAAGGCAGGCAATGGGGCCGTGGTCGTAGTGGTGGCCAGGTGCGTGATGAATATCGGACTGATTATGATCCTGATATCCTTGGAACTATTTAA 435 0.4207 MASLFKDLSKLSAYRDRRFAGTQEEFEHALETSTTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPDILGTI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0796 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Bisa12g0796 144 SUPERFAMILY RNA-binding domain, RBD 27 137 IPR035979 GO:0003676
Bisa12g0796 144 CDD RRM_NCBP2 36 113 IPR034148 -
Bisa12g0796 144 FunFam Nuclear cap-binding protein subunit 2 4 143 - -
Bisa12g0796 144 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 139 IPR027157 GO:0000339|GO:0005846|GO:0045292
Bisa12g0796 144 SMART rrm1_1 35 108 IPR000504 GO:0003723
Bisa12g0796 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
Bisa12g0796 144 Gene3D - 5 143 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0796 Bisa-ChrBisa12 12730843 12732196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0796 31 107 Eukaryotic Initiation Factors Gene Family AT1G49760 27.273 1.21e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0796 12 12730843 12732196 Bisa12g0796 12 12730843 12732196 ECH