Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0789 ATGACTCAGTGCGATGACTCTGAAAATAGTCACAGCAATATCATCGTCAAGAGACGCAAAGACAGCCTCACTAGAACCTGTCCTTCATGTGGTCATCATATCAAATGCCAAGACCAGGGTGGGATCCATGACTTACCTGGACTGCCCGCTGGAGTGAAGTTTGATCCAAGTGATCAAGAGATTCTGGAACATTTGGAAGCCAAAGTTCGATCTGATATTCATAAGCTTCATCCTTTGATCGACGAGTTCATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCCGAGAAGTTGCCAGGAGTAAGCAAAGACGGCCTGGTTCGTCATTTCTTCCACAGACCATCGAAGGCGTACACGACAGGAACACGAAAGCGGAGGAAGGTGCACAGCGATGACGTGGACGGCAGCGAGACACGGTGGCACAAGACAGGGAAGACGAGGCCCGTGTACACGTGTGGCCAGCTGATTGGCTACAAGAAGATCCTCGTACTCTACACCAACTACGGGAAGCAACGAAAGCCCGAGAAGACCAACTGGGTGATGCACCAGTACCACCTTGGGTTCAACGAGGAGGAGAAAGAAGGAGAGCTTGTGGTGTCCAAGGTTTTCTACCAGACTCAGCCCAGGCAGTGTGGATCCTTACTCATGAAAGATTCGGTTAATCCTAAGAACATAAAGGATAGTAATAATACCAATAATAACAGTGGGTTTGTTGAGTACTATACTTCTGGTTTCTTGTCGTTTGATCATGCGGGTCAACAGAGATCTGGGAATTCTCAGGTGGTGTCCCATTTTGGCGTTCAGGGTGGTTCTTCCTTCATGCCTTGA 837 0.4839 MTQCDDSENSHSNIIVKRRKDSLTRTCPSCGHHIKCQDQGGIHDLPGLPAGVKFDPSDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHSDDVDGSETRWHKTGKTRPVYTCGQLIGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGFNEEEKEGELVVSKVFYQTQPRQCGSLLMKDSVNPKNIKDSNNTNNNSGFVEYYTSGFLSFDHAGQQRSGNSQVVSHFGVQGGSSFMP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0789 278 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Bisa12g0789 278 FunFam NAC domain-containing protein 73 57 212 - -
Bisa12g0789 278 Gene3D NAC domain 57 213 IPR036093 GO:0003677|GO:0006355
Bisa12g0789 278 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
Bisa12g0789 278 MobiDBLite consensus disorder prediction 127 142 - -
Bisa12g0789 278 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Bisa12g0789 278 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 18 229 IPR044799 GO:0003700
Bisa12g0789 278 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0789 Bisa-ChrBisa12 12659309 12661338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0789 22 215 NAC Transcription Factor Family AT4G28500 82.474 7.88e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g0789 NAM 4.1e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0789 12 12659309 12661338 Bisa12g0789 12 12659309 12661338 ECH