Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0788 ATGGAATTTCAAGCATTTTCCATAGTGGAGAAGCTATTTTCCATAACATCTGGGTGGGAAAAACATAAAGGAAAAAATGGAAACCACGTCAGTGTTTTTTCCGCCCTGGAATGGAGCCTCTTCATCAGGGTTGGCCAACCAAACACGGGAGATGGTACTGTTGCTGGGAATGGACGATTGCTTTCTGGATAGTCAAAGTCCAAAAAAATACAGCTTGAGATGCTGCTGCAACAAAAGATGGATGATGCAGAGATTTCAAATGGTTTTCCTCATCATCAGAATCCAAATGATCATCATGTTCATGCATCTAATAATAACAATCCTCCTGCTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGGCAAGCTGATTATTCTCTTTCTCATCGGTCTCTCCTTATTAATTAGTTTTTCTATCACAAGTATATTCAAAAGTCAATTGCTTTTTATGAGAAAATCGTTTATGAGAATCTTCTGTTTATGCACAGATCCTGAAGCAGAGGTCATAGCCTTGTCACCAAAGACTCTGATGGCTACCAACAGATTCTTGTGTGAAATTTGTGGGAAGGGTTTCCAAAGGGATCAAAACCTTCAGCTCCATAGAAGAGGACATAATCTGCCATGGAAGCTGAAGCAGAGGACGAGCAAAGAACCAAGGAAGAGAGTTTATGTATGCCCTGAAAAGACGTGTGTTCACCACGACCCTTCAAGGGCTCTGGGGGACTTGACTGGGATAAAGAAGCACTTTTGCAGAAAGCATGGGGAGAAGAAGTGGAAGTGTGAGAAGTGCTCAAAGCGATATGCTGTTCAGTCAGACTGGAAAGCCCACTCTAAGACCTGTGGCACCAGAGAATACAAATGTGATTGTGGGACTATCTTTTCACGGAGAGATAGTTTCATAACTCACAGGGCCTTCTGTGACGCCTTAGCAGAAGAGACAGCAAGAGTAAATGCAGCATCTGCATTGAACAGCTCCTTTGTGGATTACAACATCATAGGAAACGCCCAGGGATCTTCAATTATGCCCACCCATTTTCCTTCTATTTTCAAGCCATTTTCAAGCACTGGTGTTACTGAAACAAATCATCAAACACCTGGAGGACTGTCTTTATGGATGGATCAAACTCAAGGATCTCAAGCTCATGACACAATGGCCAACAGTCACAATAACAACAACAATAATCTGCTTCAGTTCCATCAACTTGGGTCAGCCACCAACTCATCATCAGGATCGATATATGGGAACAACATTAATAACCCAATTGTTTCAATGTCGTCCTCAAACTATCAGCTGAATTGGATGTTTGGAAACAACAAGCTTCCCTCCAATGGCAGTCATCAAGAGCTGATTAGTGTTCCTTCCTTGTACAGTTCTCAACATCAATCCCATCAAACATCTTCAGCAAACATGTCGGCCACAGCTTTGTTGCAGAAAGCTGCTCAAATCGGGGCAACTTCGACCGACCCATCATTCCTAGGAAGCTTAGGGTTGAAATGCAAGAATAATCAAGATCAAGAAGGGAACAAATTTTGCGGAATGTATGGCTCAAATCCATCATTACTCGTAACTAGCCTTGCAAGTGAGACACAGAACCCTGCAAAACGCAGACGTTTACAGAACGATGAGAGTACAACAGGGGAACAAACTAGGGATTTTCTCGGTGTAGGTGTGGAATCCATTTGCCACCCTTCCCCAATCAATGGATGGATTTGA 1716 0.4283 MEFQAFSIVEKLFSITSGWEKHKGKNGNHVSVFSALEWSLFIRVGQPNTGDGTVAGNGRLLSGXSKSKKIQLEMLLQQKMDDAEISNGFPHHQNPNDHHVHASNNNNPPALKRKRNLPGNPGKLIILFLIGLSLLISFSITSIFKSQLLFMRKSFMRIFCLCTDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASALNSSFVDYNIIGNAQGSSIMPTHFPSIFKPFSSTGVTETNHQTPGGLSLWMDQTQGSQAHDTMANSHNNNNNNLLQFHQLGSATNSSSGSIYGNNINNPIVSMSSSNYQLNWMFGNNKLPSNGSHQELISVPSLYSSQHQSHQTSSANMSATALLQKAAQIGATSTDPSFLGSLGLKCKNNQDQEGNKFCGMYGSNPSLLVTSLASETQNPAKRRRLQNDESTTGEQTRDFLGVGVESICHPSPINGWI 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0788 571 SUPERFAMILY beta-beta-alpha zinc fingers 182 279 IPR036236 -
Bisa12g0788 571 MobiDBLite consensus disorder prediction 85 115 - -
Bisa12g0788 571 SMART c2h2final6 183 205 IPR013087 -
Bisa12g0788 571 SMART c2h2final6 224 254 IPR013087 -
Bisa12g0788 571 SMART c2h2final6 259 279 IPR013087 -
Bisa12g0788 571 ProSitePatterns Zinc finger C2H2 type domain signature. 185 205 IPR013087 -
Bisa12g0788 571 FunFam protein indeterminate-domain 5, chloroplastic-like 237 316 - -
Bisa12g0788 571 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 205 IPR013087 -
Bisa12g0788 571 Gene3D Classic Zinc Finger 218 307 - -
Bisa12g0788 571 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 97 556 IPR031140 -
Bisa12g0788 571 FunFam protein indeterminate-domain 12-like 162 230 - -
Bisa12g0788 571 Gene3D Classic Zinc Finger 179 206 - -
Bisa12g0788 571 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0788 Bisa-ChrBisa12 12648069 12653364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0788 164 571 IDZ Gene Family AT5G44160 52.991 3.96e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa12g0788 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0788 12 12648069 12653364 Bisa12g0788 12 12648069 12653364 ECH