Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0779 ATGGCGGGACCTGTTCTTCGCTCTATCTGGTCCTCGACCAAGAAATCTTTTCCCACTTCGTCATCCCCTTTCACCCCGTGTCGCGTCTTCCCACGTGCCAACACCCTCTCACGCGCCTTCTCCGGAGCTCCGGCGACTGCCTCTTCCTCCGCCGCCGCATATAGCAGCGCCATTGACCCTTGCCGTCTTCGCAATGTGGCTGTGATCGCGCATGTTCACCATGGCAAGACCACCCTCATGGATCGACTGCTCCGTCAGTGTGGCTTCGACACACTCCAAGGGCGTGCCATGGATTCCATTAGTCTGGAGCGCAAGCTCGGTATCACAGTCGCTTCCAAGGTCACATCCATTTCATGGAAGGAAAATGAGTTAAACATTTTTGATACACCTGGACATGCAGATTTTCGTGGTGAGGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGTAGATGCTGGAGAAGGTCCCCTTGCGCAAACCAAATTTGTTCTTTCAAAAGCCTTGAAGTATGGGTTGCTACCTATTGTTCTTCTAAACAAAGTAGACCGACCAGCAGTTTCTGAGAATAGATGTAATGAAGTCAGGAGTCAGATATTTGAACTTTTTGCCAACTTGGGTGCTACAGAGAAGCAACTAGACTTTCCAGTGCTTTATGGTTCTGCAAAGGAAGGATGGGCATCGACCACCTTTACCAAGGATCCTCCTGCTGAGGCAAAAAATATGTCAGAATTGCTTGATGCCATTGTAACACATGTCCCACCACCAACAGCTAGCATCGAGGCACCATTTCAAATGTTGGTTTCATTGAAGGAACCAGACTCGAATCTTGGGCAAATTTTAACTGGACGCATTTATTCTGGGCTTGTTCGTGTTGGTGACAGCGTTCATGGATTATATAAGAAAGATTCTGGGGTAGAAAAGATTGAAGATGGAAAGGTGTTGAAATTGATGAGAAAGAAGGGTACCAACATGGTTCTAACTGATTGTGCTGGTGCTGGTGATATAATTTCACTGGCTGGCTTGGCAAGTCCATCAATAGGGCATACAGTAGCAGCTGCAGAGGTTATGTCTACATTGCCTACAATTGAGTTGGATCCTCCAACGATTTCCATGACCTTTGATGTAAATAACTCCCCATTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAAAATCGGTGAACGCCTGATGGCTGAAGCAGAAACAAACGTTGCCATAAACGTGATTCCAGGCCTATCAAAGTCAAATTATAAAGTCCAGGGAAGAGGGGAGCTACAACTGGGTATCTTAATTGAGACTATGAGACGTGAAGGATTTGAATTTTCTGTCTCTCCACCTAAAGTCGTGTATATAACTAAAAAATGTCAGAAACTTGAGCCAATAGAAGAAGTTACAATTGAGGTAAATGATGAGCACCTTGGTTTAGTACTAGAGGCCTTGTCTCATAGGCGAGGTGAGGTTACTGATCTAGGTCCTGTCTCAGGAGATGTTGGTCGGATTAGATTGTCTTTGACCTGTCCATCAAGGGGCCTGATTGGTTACAGGAGTGTGTTCAGCAGTGACACATGTGGAACTGGTTTTATGCATCGTGCTTTCCTTAAGTATGAAAAATATAGAGGTGAGATTGGCAATGTCAGGAAAGGAGTACTGGTATCAATGGATTATGGTACAATTACAGCTCATGCATTAATGAGCTTGGAAGCTCGTGGGACTCTTTTTGTTACTCCTGGAATGGAGGCATACCATGGAATGATTGTTGGCGAACATTCAAAGTATAAAGATCTTAGTGTTAATCCAGTGAGAACTGAAGAGCTTACAAATATGTGTGATGCTGGCAAGGATGAGAGTATAAAGCTATCTGCCCCTCGCCTTTTGACACTCGAAGAAGCAATAGGATATGTAGCTTCAGACGAGCTTATTGAGGTTACTCCAAAGGCTGTGCGGCTAAGGAAGAAGCGTCTTCATATTTACATGGGCAAAAAAAGAAGTTGGAGGCCAACGCGTAGGAACAATTGGTTGAATTATCTATGA 2043 0.4498 MAGPVLRSIWSSTKKSFPTSSSPFTPCRVFPRANTLSRAFSGAPATASSSAAAYSSAIDPCRLRNVAVIAHVHHGKTTLMDRLLRQCGFDTLQGRAMDSISLERKLGITVASKVTSISWKENELNIFDTPGHADFRGEVERVVGMVEGAILVVDAGEGPLAQTKFVLSKALKYGLLPIVLLNKVDRPAVSENRCNEVRSQIFELFANLGATEKQLDFPVLYGSAKEGWASTTFTKDPPAEAKNMSELLDAIVTHVPPPTASIEAPFQMLVSLKEPDSNLGQILTGRIYSGLVRVGDSVHGLYKKDSGVEKIEDGKVLKLMRKKGTNMVLTDCAGAGDIISLAGLASPSIGHTVAAAEVMSTLPTIELDPPTISMTFDVNNSPLAGRDGTHLTGGKIGERLMAEAETNVAINVIPGLSKSNYKVQGRGELQLGILIETMRREGFEFSVSPPKVVYITKKCQKLEPIEEVTIEVNDEHLGLVLEALSHRRGEVTDLGPVSGDVGRIRLSLTCPSRGLIGYRSVFSSDTCGTGFMHRAFLKYEKYRGEIGNVRKGVLVSMDYGTITAHALMSLEARGTLFVTPGMEAYHGMIVGEHSKYKDLSVNPVRTEELTNMCDAGKDESIKLSAPRLLTLEEAIGYVASDELIEVTPKAVRLRKKRLHIYMGKKRSWRPTRRNNWLNYL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0779 680 Gene3D - 454 548 - -
Bisa12g0779 680 FunFam GTP-binding protein TypA 454 548 - -
Bisa12g0779 680 NCBIfam small GTP-binding protein domain 64 193 IPR005225 GO:0005525
Bisa12g0779 680 SUPERFAMILY EF-G C-terminal domain-like 368 452 IPR035647 -
Bisa12g0779 680 FunFam GTP-binding protein TypA 549 635 - -
Bisa12g0779 680 SUPERFAMILY EF-G C-terminal domain-like 463 579 IPR035647 -
Bisa12g0779 680 Gene3D - 61 259 IPR027417 -
Bisa12g0779 680 Gene3D Elongation Factor G (Translational Gtpase), domain 3 371 656 - -
Bisa12g0779 680 SUPERFAMILY Translation proteins 208 364 IPR009000 -
Bisa12g0779 680 PRINTS GTP-binding elongation factor signature 177 186 IPR000795 GO:0003924|GO:0005525
Bisa12g0779 680 PRINTS GTP-binding elongation factor signature 141 152 IPR000795 GO:0003924|GO:0005525
Bisa12g0779 680 PRINTS GTP-binding elongation factor signature 65 78 IPR000795 GO:0003924|GO:0005525
Bisa12g0779 680 PRINTS GTP-binding elongation factor signature 125 135 IPR000795 GO:0003924|GO:0005525
Bisa12g0779 680 Gene3D bipa protein 549 659 IPR042116 -
Bisa12g0779 680 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 263 454 - -
Bisa12g0779 680 FunFam GTP-binding protein TypA 62 259 - -
Bisa12g0779 680 Pfam Elongation factor Tu domain 2 280 353 IPR004161 GO:0005525
Bisa12g0779 680 NCBIfam translational GTPase TypA/BipA 63 660 IPR006298 GO:0003924|GO:0005525
Bisa12g0779 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 268 IPR027417 -
Bisa12g0779 680 FunFam Elongation factor family protein 260 364 - -
Bisa12g0779 680 CDD BipA_TypA_C 463 543 IPR035651 -
Bisa12g0779 680 Gene3D Translation factors 261 364 - -
Bisa12g0779 680 FunFam GTP-binding protein TypA 371 480 - -
Bisa12g0779 680 Pfam Elongation factor G C-terminus 461 546 IPR000640 -
Bisa12g0779 680 CDD BipA_III 370 448 IPR047043 -
Bisa12g0779 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 61 259 IPR000795 GO:0003924|GO:0005525
Bisa12g0779 680 Pfam Elongation factor Tu GTP binding domain 62 256 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0779 Bisa-ChrBisa12 12467091 12484633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0779 62 186 Eukaryotic Initiation Factors Gene Family AT3G22980 40.458 4.43e-22 99.8