Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0758 ATGTCGCAAACTGGGAAATCTATGCAAGAACTGGGCTATGATTCTCTTACATCTCGATTCCGTGATTCGCTGAGTTGTAAAGAGGACAAGCCCGATTTCAAAGAACTCGATCTGGGTTGGCCCATTTCGCCATTGAAAATCGGCGGCGCAGGTAATGCGGGCAGCGGCGGTGGAGCTGCCACCACTTCGAGCTCCAGCTCGAGTTCCTCCGGCTCAGTTTCCGGCAGAAGCAACGCTCCCAAGTTGCCCAGAAGACCCGACGGAAAACCAAAGCACCATTCCGGCGAACTCACTGGCTATTTCGACACTAGCCCAAAATCCTCTGAGAGCCTCCGATCCGCTACAGCAATGCGCGATTCCAGGCCCGGTCATCGGAGATCAATGTCCGCCGGAGCTCCTTTAATCTACTCCGGTGGAAGTTTCTGCAGTGCGGGCAGTAATAATTGCTCGAACGGTGCAACATCGGGGACCAATTTGTTCCCAGCGGGTAATATTTGCCCGACGGGGAAGATCCTCAAATCGGGTTTGGCGCCTCGAGCTTCCAATAGAACTGACGTGTTGGGTTCTGGAACAGCGAACTATGGCCATGGTAATATAATGCGTGGTAGCGCGAAATTGAGCAATTCTGTCGTGGATGACAATGTGGCTGGGAATTCTCAGCTTGGAGGATCAGGGGCTTTTAAGAGGGCTATGGGCGCTTCTGATCCAGAAGAGGTGAAGAGGGCTGGAAATGAGCTATATAGAAGCGGTAATTTTGTGGAGGCATTGTCATTGTATGATCGTGCTATTTTGATATCCCCGAACAATGCAGCTTACCGAAGTAATCGGGCGGCAGCGTTGACGGCGTTGGGGAGGCTGTCTGAGGCGGCAAGGGAGTGCGAAGAGGCTGTGAAATTGGACCCTGGTTATGCCAGGGCGCATCAGAGGCTGGCTTCTCTCTATCTGCGCTTTGGGCAGGTTGAAAATGTCAAGCGCCACCTCTATCTCCTTGGGCAACAGGTGGATCAATCTGAACTGCAGAAGCTGAGGTTATTGGAGAAACATCTAAACCGATGTGCAGAGGCACGAAAGATTGGAGATTGGAAGAGTGCACTTAGGGAAGCAGACGCAGCCATAGCAGTTGGGGCAGATTTCTCACCTCAGCTTGTTGCTTGTAAAGCGGAAGCTTATTTACAACTACATCAACTTGAGGATGCTGAGTGTAGACTCTCAGACACTCCCAAGTTGGAAGGTTGTCCCTCATCCTGCTCTCAAGCCAAGTTCTTTGGTATGGTTGGTGAAGCCTATGTGCCCTTTGTTCGAGCGCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGAAGCAGCAGAAAAAGCTAGACTGTTAGATTATAGTAATGCAGAAGTTGGGAGGGTTCTAAATATTGTGAAAATGGTGGCAAGAGCTCGATCCAAGGGCAATGATCTTTTTAGCTCTGGCAAATTTTCTGAAGCTTGCTCTGCTTATGGAGAAGGCCTCAAATATGACAGTTCCAACCATGTTCTATGTTGTAATAGAGCTGTTTGTTGGTCTAAACTAGGACTATGGGAAAAATCTGTTGAGGATTGCAACCAAGCTCTCATGATTCAACCACATTACACCAAGGCCCTTTTTCGCAGGGCTGTATCAAATGCAAAGCTTGAAAGATGGGCTGAAGTGGTGAAAGATTATGAGGCCTTAAAACGAGAACTCCCTGCAGATAATGAAGTTCTTGAATCCCTTCGGAAGGCTCAACTAGAGTTGAAAAAATCTCGTGGAGAGGCCTGTGCTAGGAAGCTTGAGGTTGAAGTTGAAGCCGTCTCTGCATTAGATGAATTTAAAGCTGCAATTGCCTCTGCTGGTGTTTCCGTAGTTCATTTCAAAGAGACATCAAATGAACTATGTGAAGAAATATCCCCATTCATCAACATGCTGTGCGTTAGATACCCATCTGTTAAATTCATCAAGGTGGACGTGGAGGAGTGTCTTGCTATAGCAAAAGCTGAGGGAATAAGAACTGTCCCAACTTTCAAAATTTATAAAAATGGAACGAAGGTGAAGGAGATGATCCGCCCAACGCATCAGTTCTTAGAAGAGTCCGTGAGGAACTGCAATTTTCTCTAG 2127 0.48 MSQTGKSMQELGYDSLTSRFRDSLSCKEDKPDFKELDLGWPISPLKIGGAGNAGSGGGAATTSSSSSSSSGSVSGRSNAPKLPRRPDGKPKHHSGELTGYFDTSPKSSESLRSATAMRDSRPGHRRSMSAGAPLIYSGGSFCSAGSNNCSNGATSGTNLFPAGNICPTGKILKSGLAPRASNRTDVLGSGTANYGHGNIMRGSAKLSNSVVDDNVAGNSQLGGSGAFKRAMGASDPEEVKRAGNELYRSGNFVEALSLYDRAILISPNNAAYRSNRAAALTALGRLSEAARECEEAVKLDPGYARAHQRLASLYLRFGQVENVKRHLYLLGQQVDQSELQKLRLLEKHLNRCAEARKIGDWKSALREADAAIAVGADFSPQLVACKAEAYLQLHQLEDAECRLSDTPKLEGCPSSCSQAKFFGMVGEAYVPFVRAQVEMALGRFENAVEAAEKARLLDYSNAEVGRVLNIVKMVARARSKGNDLFSSGKFSEACSAYGEGLKYDSSNHVLCCNRAVCWSKLGLWEKSVEDCNQALMIQPHYTKALFRRAVSNAKLERWAEVVKDYEALKRELPADNEVLESLRKAQLELKKSRGEACARKLEVEVEAVSALDEFKAAIASAGVSVVHFKETSNELCEEISPFINMLCVRYPSVKFIKVDVEECLAIAKAEGIRTVPTFKIYKNGTKVKEMIRPTHQFLEESVRNCNFL 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0758 708 ProSiteProfiles TPR repeat profile. 236 269 IPR019734 GO:0005515
Bisa12g0758 708 SUPERFAMILY TPR-like 237 325 IPR011990 GO:0005515
Bisa12g0758 708 FunFam TPR repeat-containing thioredoxin TTL4 600 707 - -
Bisa12g0758 708 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0758 708 Pfam Thioredoxin 611 692 IPR013766 -
Bisa12g0758 708 Coils Coil 434 454 - -
Bisa12g0758 708 MobiDBLite consensus disorder prediction 1 130 - -
Bisa12g0758 708 Pfam Tetratricopeptide repeat 242 303 - -
Bisa12g0758 708 MobiDBLite consensus disorder prediction 100 115 - -
Bisa12g0758 708 Coils Coil 565 585 - -
Bisa12g0758 708 SUPERFAMILY TPR-like 353 590 IPR011990 GO:0005515
Bisa12g0758 708 MobiDBLite consensus disorder prediction 82 96 - -
Bisa12g0758 708 MobiDBLite consensus disorder prediction 21 36 - -
Bisa12g0758 708 SMART tpr_5 428 461 IPR019734 GO:0005515
Bisa12g0758 708 SMART tpr_5 474 507 IPR019734 GO:0005515
Bisa12g0758 708 SMART tpr_5 542 575 IPR019734 GO:0005515
Bisa12g0758 708 SMART tpr_5 236 269 IPR019734 GO:0005515
Bisa12g0758 708 SMART tpr_5 508 541 IPR019734 GO:0005515
Bisa12g0758 708 SMART tpr_5 270 303 IPR019734 GO:0005515
Bisa12g0758 708 SUPERFAMILY Thioredoxin-like 515 702 IPR036249 -
Bisa12g0758 708 Gene3D Glutaredoxin 593 708 - -
Bisa12g0758 708 CDD TRX_family 612 699 - -
Bisa12g0758 708 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 703 IPR044534 -
Bisa12g0758 708 MobiDBLite consensus disorder prediction 56 77 - -
Bisa12g0758 708 Gene3D Tetratricopeptide repeat domain 234 592 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0758 Bisa-ChrBisa12 12045533 12048544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0758 248 321 Glycosyltransferase AT3G04240 35.135 5.34e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2872 02 72955574 72958980 Bisa12g0758 12 12045533 12048544 CCT
Bisa12g0758 12 12045533 12048544 Bisa12g0758 12 12045533 12048544 ECH