Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0750 ATGGACTCCCTCGCGGGAGCTCCGTCGCCTGCCGCCGCTACCGCTCCGTCGCGGCCGTCGTCGTCGCCCTTCCCCGGACGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGACGCTTGGGGCGAGCGTCACCTGGAGCTCAATCGCGGAAACCTCCGTCAGAAGCACTGGCAAGAGGTCGCCGACTCCGTTAACGCCCATCACGGCCACGTCAAGAAGGCGCGCCGAACCGACGTCCAGTGTAAGAATCGCATCGACACGCTGAAGAAGAAGTACAAGATCGAGAAGAACAAGGTCATCGAATCCGACGGCAACTACACTAGCCCCTGGCCTTTCTTCGCTCGCCTCGACGCTCTCATCGGCGATAGTTTTCCATTCAAGAGACTCTCACCGCCGGCCGACAGCGACCGCCTTAGCACCCCTCCCGCGAAGTCTCCTGCCTGGGTAAGCTTTCACGTGCCGGGCCGTCCCCGATCCTGCACTCAGAAACGGCCGTCGGCGCCGTCGCCGGCGCCGGCCAACATGGATGATTTGTATTTCCGGCGGAACTTTTCGGCTTTCGCTGCAGCGGCTGCGGCTGCAGCGGAGGCAGAGGACGCAGACACTGACGATTCAGATGGGTCGAGGTCGAGTAGTGCGAGTGGAAGTAGGAAGAGAGGAAGAGAAAGAGAGAAGAAGATGGAGACTGATAGGGATTCAGAATTTGGGTATAGGGAGCTTGCACAAGCAATAGAGAGATTCGGAGAGATATACGAGAGAGTAGAGGCGGCCAAGCAGAGGCAAATGGTGGAGTTAGAGAAACAGAGGATGCAATTTACTAAGGATTTGGAGTGTCAGAGGATGCAGCTTTTCATGGAAACGCAGGTTCAGCTTGAAAAGATCAAGCGCGCCAAACGATCTTCTCGAGCTGGTGAGAATTTTCCACCTTTTCTGTTTACAGTGACCTATCACTGCATATGCTAA 972 0.5669 MDSLAGAPSPAAATAPSRPSSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADSVNAHHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIESDGNYTSPWPFFARLDALIGDSFPFKRLSPPADSDRLSTPPAKSPAWVSFHVPGRPRSCTQKRPSAPSPAPANMDDLYFRRNFSAFAAAAAAAAEAEDADTDDSDGSRSSSASGSRKRGREREKKMETDRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFTKDLECQRMQLFMETQVQLEKIKRAKRSSRAGENFPPFLFTVTYHCIC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0750 323 Coils Coil 254 285 - -
Bisa12g0750 323 Gene3D - 31 97 - -
Bisa12g0750 323 FunFam trihelix transcription factor ASIL2 31 97 - -
Bisa12g0750 323 MobiDBLite consensus disorder prediction 200 235 - -
Bisa12g0750 323 MobiDBLite consensus disorder prediction 1 29 - -
Bisa12g0750 323 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 302 IPR044823 -
Bisa12g0750 323 MobiDBLite consensus disorder prediction 135 177 - -
Bisa12g0750 323 MobiDBLite consensus disorder prediction 218 235 - -
Bisa12g0750 323 Pfam Myb/SANT-like DNA-binding domain 28 122 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0750 Bisa-ChrBisa12 11958491 11959462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0750 193 299 Trihelix Transcription Factor Family AT3G14180 42.991 5.53e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa12g0750 Myb_DNA-bind_4 7.6e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0750 12 11958491 11959462 Bisa12g0750 12 11958491 11959462 ECH