Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0742 ATGGCAGAGAGCATATACATATCCGACGAAGAGTACAAGAACGAAGACACTGATTTTGAAGGGAATCCCACGTCTGTAAGTCCTAAGAAACGTTCATTCTTGGACTTAAACGAAGAAGCTGGTGTGGATGAGGATGATGATGGCGAGGCTCATGAGACCAGTGTTAATGAGAGGTCGTCATCATCATCTCCAGAAGGAAATATGAGCAGCAATACTAATAACTCAAGCACAGAAGGGAAAGAAAGAAGCACAGGCGTAAGGCAATATGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTAGCATTTGTGCTCGCTGTTGAGAGACTTGGTGGACAGGAAAGAGCAACACCCAAGTTGGTTCTTCAGCTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAACTTGATGAGTCTGGCCAAGTTTTATCTCGAAAGAGGGCAACGCAAGGAAAAGATCACATTGTGGAGATGTATGAAAGATATAGTAAAGCCCAGGGACACTTCGGGATTGATACCAGAAACAGAAACTATCTACCATCATCTGTGCTAATGAAACACCCGTATGACTTCATAGCTCAAGGCTCTCCAAGGTTTCAGGCGTGTGGGATAGTGAATAATAACCATTTGACAAGACCAAGTTCAGAGTGGAGCAACAGAATGGGAAACTCACATATATTTGATGTAAGGAACGCAATAACCAGAAGCAGCGGGCCTCTAAGGTGTAGCCAGTTTCTTGAAGATGAGAAATGGCGTCCTCGTGAGATGGTTGGACATGGATCGCAAGGCTGTACTGATCATTCACGTATTGAATCAGGAAGCGTTTCTTGGGATGATAAGTATAATAATAATATGAATGCAGAAGCTGCTAGTTCTCTATGGAGAACCAAAGCTACCTCTTTCCATGATCATCACCGATATCAACCTGAAGGTTCTTGCGCTCCTATCTTCTCTAGCCATGTACATTTTGATGCTAAGGTCCAGTATCTAACAGATGGAATGCTGCGATTCACAAATCATGAAGATCATCAGTTATGGCAAGCAGGTGATGAGGTTAAAGCCCAATCAGAGAGGTTATTGAAGGAGAAGAAAGAGTCACCAAGTTTCTTAGAGCTAAGTTTAAGAGAGCAGGATTCTGGAATTAATGCTAGAGAGATGAAGGCATCATCAGGTCCAGAAAGTGAACAAGTTAATACCATGCTTTCTCTTTCATTGTTCCCTTCATCACATCAACAAGGAGCACAGCAATATTCTAATAAATATAGTAATTAA 1317 0.4207 MAESIYISDEEYKNEDTDFEGNPTSVSPKKRSFLDLNEEAGVDEDDDGEAHETSVNERSSSSSPEGNMSSNTNNSSTEGKERSTGVRQYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSRKRATQGKDHIVEMYERYSKAQGHFGIDTRNRNYLPSSVLMKHPYDFIAQGSPRFQACGIVNNNHLTRPSSEWSNRMGNSHIFDVRNAITRSSGPLRCSQFLEDEKWRPREMVGHGSQGCTDHSRIESGSVSWDDKYNNNMNAEAASSLWRTKATSFHDHHRYQPEGSCAPIFSSHVHFDAKVQYLTDGMLRFTNHEDHQLWQAGDEVKAQSERLLKEKKESPSFLELSLREQDSGINAREMKASSGPESEQVNTMLSLSLFPSSHQQGAQQYSNKYSN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0742 438 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 71 182 IPR046955 GO:0003700
Bisa12g0742 438 SUPERFAMILY Homeodomain-like 93 149 IPR009057 -
Bisa12g0742 438 FunFam Myb family transcription factor 93 151 - -
Bisa12g0742 438 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 150 IPR006447 GO:0003677
Bisa12g0742 438 Gene3D - 94 151 - -
Bisa12g0742 438 MobiDBLite consensus disorder prediction 1 86 - -
Bisa12g0742 438 Pfam Myb-like DNA-binding domain 97 147 IPR001005 -
Bisa12g0742 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 151 IPR017930 -
Bisa12g0742 438 MobiDBLite consensus disorder prediction 387 411 - -
Bisa12g0742 438 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0742 Bisa-ChrBisa12 11830002 11833549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0742 83 233 G2-like Transcription Factor Family AT2G42660 47.403 1.19e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa12g0742 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0742 12 11830002 11833549 Bisa12g0742 12 11830002 11833549 ECH