Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g0731 | ATGATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCAGGAAATTTCCCAGCAATGGGTAAGGAGTTTAAAGAAAGGAAGGGGCTGCCAAGGGTTAAGAGTGTCCCTGGGATAATCTCAGAAATTGACGATGATCAGGCACTTAGTGTTTCGTCTGATAATCCATCAACTGTTTCTACAGATCGGATGATCATTGTAGCAAACGATCTTCCTTTGAAAGCAAAGCGGAAGGAGGACAATAAGGGGTGGAGTTTCAGTTGGAATGAGGATTCGTTGCTTTTGCAGCTTAAGGATGGACTTCCAGAAGATATGGAGGTTCTTTATGTTGGGTCATTGCGGGCTGATGTTGATTCTGCTGAACAGGATGATGTGTCACAGTATTTATTGGATAAATTCAAATGTGTCCCTACTTTTCTGCCCCCTGATGTATTGACTAAATTTTATGATGGATTCTGCAAAAGGCATTTATGGCGACTGTTTCATTACATGTTGCCATTTTCAACTGATAAAAGCCTATGTTTTGATCGCACTTTGTGGGAAGCCTATGTGACAGCAAATAAGATATTTTTTCAGAAGTTAGTTGAGATAATAAACCCAGAGGATGATTATATTTGGATCCATGATTATCATTTGATGGTGCTGCCAACTTTTATAAGAAGGCGCTTTAACAGGGTGAAAATGGGATTTTTTTTGCATAGCCCCTTTCCATCTTCAGAGATATATCGGACTCTTCCTGTCAGGGAAGAGATACTTAAGGCCTTACTTAACTCTGATATCATTGGTTTTCACACCTTTGACTATGCTCGTCATTTCCTTTCTTGTTGCAGTCGTATGTTGGGCCTGGAGTATCAGTCAAAGAGGGGCTACCTAGGATTAGAATATTATGGAAGGACTATCAGTATTAAGATCATGCCGGTTGGGGTTCATATGGGTCGTATTAAATCAGTCATGAGAATGGCTGATGAGGAGTGTAAAGCAAAGGAGCTGAAACAACAATTTGAAGGAAAAACCATCCTGCTTGGTATTGATGATATGGATATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAGCATCCTAAATGGAAGGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCAAGGGGTAATGGGACACATTTAGAGGGCATACGGGCTGAAATACATGAAAGCTGCTCCAGGATCAACAGAGTATATGGGCGGCCGGGTTATGAACCTATTGTTTTTATTGATAGATCAGTTTCAATTGTTGAAAAAGTTGCTTATTATAGCATTGCTGAGTGTGTTGTTGTCACAGCCGTAAGAGATGGGATGAACCTTACCCCTTATGAATATATTGCCTGTAGACAGGAAATATCTGGTTCTGAGTCATGCACTAACGTCAACGGCTCGAAGAGCATGCTAGTAATATCGGAATTTATTGGCTGTTCTCCGTCACTTAGTGGGGCTATCCGTATCAATCCATGGAATGTTGAAACAACAGCAGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAACATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGCTTCTTGCATGATATGGAGAGGGCTTGCACAGACCTTTTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTCGAGTTGTGGCACTTGACCCTAATTTTAGAAAGCTCTCGATTGATGCTATGGTTTCAGCCTACAAGAGGGCAAAGATTAGGGCCATTTTGTTGGACTATGATGGTACTGTAATGCCACAGAATTCTATTAATAAGAGTCCAAGTAAAGAGGTCATCTCTATTTTGAATACACTTAGTGCAGACTCCAAAAATGTAGTTTTCATTGTCAGTGGGAGGGGGAGGGATAGCTTGAGTACCTGGTTCACTCCCTGCAAAAAACTTGGAATTGCAGCAGAGCATGGATACTTCTTGAGGTGGTCCCAGAGTAAAGAATGGGAAATTGGCGGTAAGAGCTCTGATTTTGGCTGGATGCAGATTGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTCTGGCAATATAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAAGATCTTTTCATCAATGGCTGAGCAGGGAAAGCAGGCTGAATTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAACAATTAGTAGTGCAATCTCGAGAAATATTCTTTCTGCCAATAGTTCCGTATTTGCTTGCACAGTTGGACAAAAACCGAGCAAAGCTAAGTATTATGTGGACGATACAACTGAGGTCATAAGCATGCTAGAATCTTTGGCTGAAGAATCTGATTCTTCACCTGCATAG | 2547 | 0.4146 | MMSRSYTNLLDLASGNFPAMGKEFKERKGLPRVKSVPGIISEIDDDQALSVSSDNPSTVSTDRMIIVANDLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGLPEDMEVLYVGSLRADVDSAEQDDVSQYLLDKFKCVPTFLPPDVLTKFYDGFCKRHLWRLFHYMLPFSTDKSLCFDRTLWEAYVTANKIFFQKLVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIKSVMRMADEECKAKELKQQFEGKTILLGIDDMDIFKGIDLKILAMEQMLKQHPKWKGRAVLVQIVNPARGNGTHLEGIRAEIHESCSRINRVYGRPGYEPIVFIDRSVSIVEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQEISGSESCTNVNGSKSMLVISEFIGCSPSLSGAIRINPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLHDMERACTDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKIRAILLDYDGTVMPQNSINKSPSKEVISILNTLSADSKNVVFIVSGRGRDSLSTWFTPCKKLGIAAEHGYFLRWSQSKEWEIGGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMAEQGKQAEFVLCVGDDRSDEDMFETISSAISRNILSANSSVFACTVGQKPSKAKYYVDDTTEVISMLESLAEESDSSPA | 848 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0731 | 848 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 31 | 841 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa12g0731 | 848 | Gene3D | Glycogen Phosphorylase B; | 56 | 316 | - | - | |
| Bisa12g0731 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 721 | 848 | - | - | |
| Bisa12g0731 | 848 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 317 | 529 | - | - | |
| Bisa12g0731 | 848 | CDD | HAD_TPP | 593 | 832 | - | - | |
| Bisa12g0731 | 848 | CDD | GT20_TPS | 63 | 545 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa12g0731 | 848 | Gene3D | - | 591 | 697 | IPR023214 | - | |
| Bisa12g0731 | 848 | Gene3D | - | 720 | 847 | IPR023214 | - | |
| Bisa12g0731 | 848 | Pfam | Trehalose-phosphatase | 595 | 829 | IPR003337 | GO:0003824|GO:0005992 | |
| Bisa12g0731 | 848 | NCBIfam | trehalose-phosphatase | 589 | 840 | IPR003337 | GO:0003824|GO:0005992 | |
| Bisa12g0731 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 591 | 708 | - | - | |
| Bisa12g0731 | 848 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 63 | 549 | - | - | |
| Bisa12g0731 | 848 | Pfam | Glycosyltransferase family 20 | 63 | 545 | IPR001830 | GO:0003824|GO:0005992 | |
| Bisa12g0731 | 848 | SUPERFAMILY | HAD-like | 592 | 840 | IPR036412 | - | |
| Bisa12g0731 | 848 | Gene3D | Glycogen Phosphorylase B; | 317 | 529 | - | - | |
| Bisa12g0731 | 848 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 56 | 315 | - | - | |
| Bisa12g0731 | 848 | NCBIfam | HAD-IIB family hydrolase | 594 | 795 | IPR006379 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g0731 | Bisa-ChrBisa12 | 11704962 | 11708549 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0731 | 1 | 846 | Trehalose Biosynthesis Gene Families | AT1G06410 | 76.860 | 0.0 | 1353 |