Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0730 ATGGCATCCCCTATTTCGAGCTCTCTGTCATCCATGAAGACATCTAAACCTTCTGTTTGTAGAGCAGCCATAAGATTATCAGCAAGAAGTGGCTACAATCTGGGTTTGAAAATTGTAAGCAGGGTCCAGTTATGCATGGTTGTCAAGCTGTGTCCAAAAAGTATAAAGCTAAAGCATCCACCTACACTTCAAGAATGTGATTCTTTCGTGATTTTCTTCTTCGTTTCTGAGCCGCAGCCACCATGCAAGAGCATCTTCAAAATGGAAAACTCCAACAATTTCACACCTTTGCCTGGGGCTTGGCGAAGAGATGTTAGAGCCTATGGTACCCATAGTCCCAATAATAGTGGCTACAATGAGGTGCCTGTGATTTACCAATCTCTTTCCATTCAAGCTCCTGATGACAGGATTTCAGGCGTGCAAGATACAGCGAGGTTGATGGAAGATAGAACACCTTCAGGACTCAACAGCATACCCAACTACCCAACACAACTGCATGGCAGACAACACATGAATGTTCTCAATAGGGACATAAGAAGGGGGTTCAACCCCAGGTTCGGGGAGATTGTTCAGCAGTCAGCTCCAAGAGCAGTAGAAAATTCCAGATCAGCAGCCTTGAGCAAGCTTAAGAAAGAAATCTATGAAACCCCGAAGCTTTTACCAAAGAAAGTGAGCTTATGTTACAGAGACAGTGTTGTGAATGCTTTAAAAGAGACAGAAAGGGAAGAGCAAGAATGTTGCAAGAGGTGTGCTGTTTGCTTGGAAGATTTTGAACAAAAAGAGGAGGTGATGCTCACTCCATGCAAACATGTATTTCATGAGGATTGTATAGTACCATGGTTAACAAGCAAAGGTCAATGTCCAGTTTGTAGGTTCGTGATTTGTGAGGTGATGGAGGACCCATCATCCTACAACAATAATAACAATATTGCCATTATGGCACCCAATGGCCTCCTAATTGCAGGAGAACTTCTATCAATTTTCAGGGCCATGCAGGAAGCTATCCATTTGGGCAATGGAACTCACTGA 1029 0.4334 MASPISSSLSSMKTSKPSVCRAAIRLSARSGYNLGLKIVSRVQLCMVVKLCPKSIKLKHPPTLQECDSFVIFFFVSEPQPPCKSIFKMENSNNFTPLPGAWRRDVRAYGTHSPNNSGYNEVPVIYQSLSIQAPDDRISGVQDTARLMEDRTPSGLNSIPNYPTQLHGRQHMNVLNRDIRRGFNPRFGEIVQQSAPRAVENSRSAALSKLKKEIYETPKLLPKKVSLCYRDSVVNALKETEREEQECCKRCAVCLEDFEQKEEVMLTPCKHVFHEDCIVPWLTSKGQCPVCRFVICEVMEDPSSYNNNNNIAIMAPNGLLIAGELLSIFRAMQEAIHLGNGTH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0730 342 FunFam RING/U-box superfamily protein 234 309 - -
Bisa12g0730 342 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 153 292 - -
Bisa12g0730 342 ProSiteProfiles Zinc finger RING-type profile. 250 291 IPR001841 -
Bisa12g0730 342 SMART ring_2 250 290 IPR001841 -
Bisa12g0730 342 SUPERFAMILY RING/U-box 243 299 - -
Bisa12g0730 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 295 IPR013083 -
Bisa12g0730 342 Pfam Ring finger domain 249 291 IPR001841 -
Bisa12g0730 342 SMART ringv_2 249 291 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0730 Bisa-ChrBisa12 11702108 11704408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0730 200 339 C3H Transcription Factor Family AT3G58720 50.336 4.41e-34 124