Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0721 ATGGTAAGCCTTTTGAAATCATCCCTGAAGACAGTTAAACCTGCTCTCTGTAGAGCACTCAAAAGCTTACCAGTGAAGTCCCAAGTGTCGACCATGCTGAAACTGAGAAACACATCGTGCTTCCAGATTTGCCCAGATGAGGAGCTGCTTAGGAAATTCATCGGAAAACTGGAGTCAATTGCTCGGACAGATTTTTACAACTATTTCAACAATATTTTCCATGGTAAAGACTGTCGCAACTTTGCTGATAATCTTAAGTCTGCTCTACAAACAGAAGGTTTAGATGTCTTCATGGATGATAAAGAGCTCGAAATAGGTTCATCATTCCTTGAAAAAATCCTAGATGTCGTCAAGCATGCGATTTCATCACAGTTCGCCTTCCATGAAGAAATCCTGGGTTCCAAAGTTATTATCATTGTCGTTTCAAGAAGCTATAGAACTGTTTCGCTGCCTTCCCTGATATTATTGGGAAAGTTCCTCATTGAGAACATTGAGATTTATCTGCCCTTGCCAATTTTGTACCATCTACAAGATGCAACTAACATGCTAGATGAACAAGCAGCTACTGATTTCATTCTTACGGCAGTACGGTCTCGATTGGGTTATAAAGTGTCAGATGTTGCTGATGCTGGCTTAGTTGGGATTCAACCTCGTGTGAAAAAATTAGAAAAGCTTTTGAATTTGGACGCAAACGTGGTGCAAATAGAAATGCATAGTCTAGTGCAAGAATTGGGAAGAAAAAGTGTTCGAGGAGACGACAAAGAACCAGGACTGCATAGTAGGTTATGGCTTTATGATGATTTTCTTAATATTCAGATGACACCGATGCCAACTACAAAAGTTGAAGCGATAGTCTTGAATCATGAAGAACAGAAAGAGACTCCACTTAAGGCTGAAGCTTTCTCAAAATTGGGCCTTCTTAGACTCCTCATAGTCCACAATGTGAAATTTTCAGGAAGTCTCAATAGCCTTTCTAATGAGCTATGCTATATTTTGTGGGATAAATACCCTTTCACTTATTTGCCTCCAAGTTTTGAGCCGCAACAACTTGTAGAACTGATTATGCCTGGCAGCAACATCACACAACTATGGGAAGGCATAAAGATGCTCCCGAAGTTGAGAAGTATAAACCTCCGTGGCTCTGAAAAACTAATCGAGACACCAGATTTTAGTGGGGTCCCAAATCTTGAGAGGCTAGACCTTGAAGGATGTACTGCATTATTGAAGCTTCATCCCTCTATTGCATTTCTTTCAAAGCTCACATTGTTGAATTTGAGAAACTGCATTAGCCTGGACAGTATCCCAAATGACTTATTTGGTCTAAGCTCTCTCCAAGTTCTAAATCTGGCTGGCTGCTCAGAACTTGCCAAATGCTTGAACTTTGACCCTTTGAGGAGTTCAATAGAAGCCACACTTCTAAGCATTCGTTTTCCTCCTTTCTTGGCTAAACTGTTATCTTTAACTTATATTTGTTTCTCAAAAGATATGAGCACTAATGAGTTGACCATTTGTTGCTTTATTTGGCTGATCTACTGTATTTGCAATGTCTCGTTGTTATGA 1560 0.3987 MVSLLKSSLKTVKPALCRALKSLPVKSQVSTMLKLRNTSCFQICPDEELLRKFIGKLESIARTDFYNYFNNIFHGKDCRNFADNLKSALQTEGLDVFMDDKELEIGSSFLEKILDVVKHAISSQFAFHEEILGSKVIIIVVSRSYRTVSLPSLILLGKFLIENIEIYLPLPILYHLQDATNMLDEQAATDFILTAVRSRLGYKVSDVADAGLVGIQPRVKKLEKLLNLDANVVQIEMHSLVQELGRKSVRGDDKEPGLHSRLWLYDDFLNIQMTPMPTTKVEAIVLNHEEQKETPLKAEAFSKLGLLRLLIVHNVKFSGSLNSLSNELCYILWDKYPFTYLPPSFEPQQLVELIMPGSNITQLWEGIKMLPKLRSINLRGSEKLIETPDFSGVPNLERLDLEGCTALLKLHPSIAFLSKLTLLNLRNCISLDSIPNDLFGLSSLQVLNLAGCSELAKCLNFDPLRSSIEATLLSIRFPPFLAKLLSLTYICFSKDMSTNELTICCFIWLIYCICNVSLL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0721 519 Gene3D Ribonuclease Inhibitor 279 469 IPR032675 -
Bisa12g0721 519 Pfam Leucine Rich Repeat 349 368 IPR011713 -
Bisa12g0721 519 SUPERFAMILY Toll/Interleukin receptor TIR domain 71 147 IPR035897 -
Bisa12g0721 519 Gene3D - 71 177 IPR035897 -
Bisa12g0721 519 SUPERFAMILY L domain-like 291 494 - -
Bisa12g0721 519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 229 461 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0721 Bisa-ChrBisa12 11523783 11531169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0721 235 463 WRKY Transcription Factor Family AT4G12020 37.398 4.58e-31 126