Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g0685 | ATGAAAGGCGAATCAACAGGACTCATCATTGGGATTTCGATAGGTGTGGTCATAGGTGTTGTTTTGGCTATTTCTGCACTGTTTTGTGTCAGATACCATAGAAAGCGTTCACAGATAGGGAATAGCAGCTCCCGGCGGGCGGCCACCATACCCATCCGGGAAAATGGTGCTGACTCTTGCACCATTTTGTCAGACTCAACCCTAGGCCCAGAATCCCCTGTGAAGTCTGCACGCAGTGGCATGTCCTTCTGGCTTGATGGCTTCAAGAAAAGCAGCATGGTCTCAGCTTCTGGAATACTCGAGTATTCTTACAAGGATTTGCAGAAAGCAACATATAATTTTACAACACTGATTGGACAAGGTGCATTTGGTCCTGTATATAAAGCTCAAATGTCAACTGGAGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTCCATACAGAGGTTATGTTGTTGGGAAGGTTGCACCATAGAAACCTGGTTAATTTGGTAGGGTATTGCGCAGAGAAGGGGCAGCATATGCTTGTGTATGTGTACATGAGTAAAGGCAACTTGGCTTCCCATTTGTACAGTGAAGAGAATGGGGCGATGAGCTGGAATTTAAGGGTTCATATAGCTCTAGACGTAGCAAGAGGGTTGGAATATCTTCATGATGGGGCAGTTCCTCCCGTAATCCATCGAGATATCAAATCTTCTAATATTCTGCTAGACCAGTCAATGAGAGCCAGAGTTGCTGATTTTGGGCTTTCAAGAGAAGAGAAGGTGAATAAACATGCAGATGTTAGGGGTACCTTTGGCTATCTTGACCCTGAATATATATCTTCAGGGACTTACACGAAGAAAAGCGATGTGTACAGTTATGGGGTGTTGCTGTTTGAGCTTGTAGCTGGCAGAAATCCCCAGCAAGGTCTCATGGAATATGTTGAGCTTGCAGCGATGAACACAGAGGGAAAAGTGGGGTGGGAGGAGATAGTGGATGGGAGGCTGGAAGGGAAGTTGGATGTGGAAGAAGTGAACGAAGTGGCAGGACTCGCACACAAGTGCATCAATGCAGCCCCAAGGAAACGACCCTCCATGAGAGACATAGTCCAAGTCCTCTCACGAATCCTCAAATCCAGACACGCCAACACTCGTCACAGAAGGGCTTCGTCTGACAAACCAGATGAACTCTCCATTCATCTGCATCACCGAAGAGATGAGTCTATAGATAGTGCTGCTGACACCTACGAACCCTAG | 1260 | 0.4619 | MKGESTGLIIGISIGVVIGVVLAISALFCVRYHRKRSQIGNSSSRRAATIPIRENGADSCTILSDSTLGPESPVKSARSGMSFWLDGFKKSSMVSASGILEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGNLASHLYSEENGAMSWNLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEKVNKHADVRGTFGYLDPEYISSGTYTKKSDVYSYGVLLFELVAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDGRLEGKLDVEEVNEVAGLAHKCINAAPRKRPSMRDIVQVLSRILKSRHANTRHRRASSDKPDELSIHLHHRRDESIDSAADTYEP | 419 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0685 | 419 | Pfam | Protein tyrosine and serine/threonine kinase | 114 | 374 | IPR001245 | GO:0004672|GO:0006468 | |
| Bisa12g0685 | 419 | MobiDBLite | consensus disorder prediction | 389 | 413 | - | - | |
| Bisa12g0685 | 419 | FunFam | Calcium/calmodulin-regulated receptor-like kinase 1 | 86 | 187 | - | - | |
| Bisa12g0685 | 419 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 387 | IPR011009 | - | |
| Bisa12g0685 | 419 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 400 | - | - | |
| Bisa12g0685 | 419 | FunFam | calcium/calmodulin-regulated receptor-like kinase 1 | 188 | 396 | - | - | |
| Bisa12g0685 | 419 | PANTHER | OS01G0750732 PROTEIN | 3 | 387 | - | - | |
| Bisa12g0685 | 419 | MobiDBLite | consensus disorder prediction | 381 | 419 | - | - | |
| Bisa12g0685 | 419 | CDD | STKc_IRAK | 118 | 377 | - | - | |
| Bisa12g0685 | 419 | SMART | serkin_6 | 112 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa12g0685 | 419 | Gene3D | Phosphorylase Kinase; domain 1 | 85 | 187 | - | - | |
| Bisa12g0685 | 419 | ProSiteProfiles | Protein kinase domain profile. | 112 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa12g0685 | 419 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g0685 | Bisa-ChrBisa12 | 10875463 | 10878440 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0685 | 98 | 374 | Receptor kinase-like Gene Family | AT3G19300 | 44.561 | 7.52e-74 | 241 |
Transcription factors information