Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0683 ATGGACTCGCAGCAGCTGTTCAGCAGTTTCAGTTTAACTGGTGCAGGGCTACCATACACATCATCTCATCCCACTGTTCCACCACTACCTAACAGGCTGCTTGGGTCCTTGAAATTTGAGTCAGGAAACTCTCCTAATTCACCCTTTTCTACTCATTTTGATTCTGATTCTCTTTCTACAGTGAGCGACAGCCAGGAGCAGCACAGCTTTGGGGAGATCCTCTCTGGCGTCAGCCCTTCTTATAACTCTTCACTGGAAACTAACTATTACTTAAACAGATCAATTTCACCTGTAAACTCTCTCCAAGACAGTCTGCATCTGTATTCTGACCGGAGCTCTCTTGTACCGGATGTGAGTTCTGGCCAGAAAATCAGGCACGCATTGCTGGAACTACAGACTGCTCTGATGGCCCCTGATGATGGCGATGAAGTTACCACTTCAAATACTTCTTTGGGTGAGAGTAGCAGGCCAACAACATCTGGCCAAAGATACAGGCGGCCTTGGATCCCAGAGCTCCAAGGGTCACAATATATTCAAAGTGTGCCAGCTTTTGTTACTAGCAGTAGGCAGTCAAGTGAGGTTGCGCGTGTAGAGAAACGTCACAAGCCAATGGAGGAAGCATGGCTACAAGGTTTCCCACCTAGCAATTTAAAGCAATTGCTGATTGCTTGCGCCAAAGCCCTCTCTGAGAACAACCAGAAAGTTTTTGATCAGTTGATTGCAAAGGCTAGGAGTGCTGTGTCTATCAGCGGGGAGCCAATCCAGCGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAATAACATCTATCATGCCCTTAAGTGCAGAGAGCCTGATGGCAAGGACTTGCTCTCTTACATGCACATGCTGTATGAGATTTGCCCCTACTTGAAGTTTGGTTACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGACATGCAGACCGAATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACCCTCCTTCAAGCTCTTGCAGCGAGGCCTGGTGGGGCTCCCCACGTGCGGATCACAGGAATTGATGATCCTGTTTCTAAATATGCTCGCGGCGATGGGCTGGAAGCCGTTGGAAGAAGACTGGCCATAATCTCAGAGAAATTTAATATCCCGGTTGAGTTTCATGGACTGCCTGTTTTTGCACCAGAGGTAAGAAGGGAGATGCTTGATGTTAGGGCAGGTGAGGTTTTGGCAGTGAACTTTCCCCTGCATCTGCATCACACGGCTGATGAGAGTGTTGATGTGAACAACCCAAGGGATGGACTTCTGAGAATGGTGAAGTCACTGTCTCCCAAGGTCGTCACATTGGTGGAACAGGAATCCAACACAAATACAACCCCTTTCTTCAACAGGTTCGTAGAAACCTTAGACTACTACCTGGCAATGTTCGAGTCAATTGATGTCACCCTGGCAAGAAATAGCAAGGAGCGTATTAACGTGGAGCAACATTGTCTGGCCAGGGACATCGTCAACGTTATTGCTTGTGAAGGGAAGCAAAGGATAGAGCGACACGAACTGTTTGGAAAGTGGAAGTCAAGGTTGACGATGGCTGGATTCCGACAATACCCGTTGAGCTCTTACGTTAACTCTGTGATCAGGAGCCTACTGAGGTGCTATTCGGAGCATTATACACTTATGGAGAAGGATGGGGCTATGTTGTTGGGGTGGAAACACAGAAATTTGACTTCAGCCTCAGCTTGGCATTGA 1764 0.479 MDSQQLFSSFSLTGAGLPYTSSHPTVPPLPNRLLGSLKFESGNSPNSPFSTHFDSDSLSTVSDSQEQHSFGEILSGVSPSYNSSLETNYYLNRSISPVNSLQDSLHLYSDRSSLVPDVSSGQKIRHALLELQTALMAPDDGDEVTTSNTSLGESSRPTTSGQRYRRPWIPELQGSQYIQSVPAFVTSSRQSSEVARVEKRHKPMEEAWLQGFPPSNLKQLLIACAKALSENNQKVFDQLIAKARSAVSISGEPIQRLGAYMVEGLVARKEASGNNIYHALKCREPDGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRHADRIHIIDFQIAQGTQWVTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEAVGRRLAIISEKFNIPVEFHGLPVFAPEVRREMLDVRAGEVLAVNFPLHLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAMFESIDVTLARNSKERINVEQHCLARDIVNVIACEGKQRIERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYTLMEKDGAMLLGWKHRNLTSASAWH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0683 587 MobiDBLite consensus disorder prediction 138 165 - -
Bisa12g0683 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 582 IPR005202 -
Bisa12g0683 587 MobiDBLite consensus disorder prediction 142 162 - -
Bisa12g0683 587 MobiDBLite consensus disorder prediction 45 64 - -
Bisa12g0683 587 Pfam GRAS domain family 217 586 IPR005202 -
Bisa12g0683 587 ProSiteProfiles GRAS family profile. 208 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0683 Bisa-ChrBisa12 10845831 10847594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0683 209 586 GRAS Transcription Factor Family AT5G48150 63.588 3.37e-174 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa12g0683 GRAS 1.7e-128 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0683 12 10845831 10847594 Bisa02g3134 02 79303017 79304759 CCT
Bisa12g0683 12 10845831 10847594 Bisa12g0683 12 10845831 10847594 ECH