Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0672 ATGGCGGTGAGGGTAGCAATCACCGCTACCCGAAGTTTAAGGCGGCTTTTCTGCACCGATTCAACTTCACCTTCACCTTCACCTTCAACTTTCGCATTCATTCCTCCTCCGGACGTGAAGCCCCGCACGAACCTCTTTGTCACTGGACTTAGCAAACGCACCACTACAAAAAGGTTATGGGAGGCTTTTTCCCAGTTTGGTAAAGTTGTTCATGCTAGAGTGATGACTGATAGACTATCAGGCATCTCTAATGGATTTGGTTATGTGAAATATACTACTAAAGAAGAAGCTGCAAAGGGCATTGAAGGCATGGATGGAAAATTTCTGGATGGTTGGATAATATTCGCACAGTATGCACAACAGAGACAACCACCTGCACGAGCTGTAAACAGTCAAACAAGACCACACCTCAGATATAGCTCAAGCACGCATCAGAAGGGCCGAAAAAAACCGATTAACTCAAGCACGCACCAGAAGGGCCGAAACAAACCGATTAACTCAAGCACGCGTCAGAAGGGCCAAAACAAACTGATTAACTCAAGCACGCATCAGAAGGGCCAAAACAAACCGATTAAACCAACTCATACCAGACTAAACCGGAGGAAAACCAAACAAAAATGA 621 0.4541 MAVRVAITATRSLRRLFCTDSTSPSPSPSTFAFIPPPDVKPRTNLFVTGLSKRTTTKRLWEAFSQFGKVVHARVMTDRLSGISNGFGYVKYTTKEEAAKGIEGMDGKFLDGWIIFAQYAQQRQPPARAVNSQTRPHLRYSSSTHQKGRKKPINSSTHQKGRNKPINSSTRQKGQNKLINSSTHQKGQNKPIKPTHTRLNRRKTKQK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0672 206 Gene3D - 18 135 IPR012677 -
Bisa12g0672 206 MobiDBLite consensus disorder prediction 123 140 - -
Bisa12g0672 206 SUPERFAMILY RNA-binding domain, RBD 33 139 IPR035979 GO:0003676
Bisa12g0672 206 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 43 121 IPR000504 GO:0003723
Bisa12g0672 206 MobiDBLite consensus disorder prediction 157 193 - -
Bisa12g0672 206 SMART rrm1_1 44 117 IPR000504 GO:0003723
Bisa12g0672 206 MobiDBLite consensus disorder prediction 141 156 - -
Bisa12g0672 206 PANTHER NUCLEOLAR PROTEIN 8 24 196 - -
Bisa12g0672 206 MobiDBLite consensus disorder prediction 121 206 - -
Bisa12g0672 206 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 45 111 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0672 Bisa-ChrBisa12 10214775 10220125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0672 42 91 Eukaryotic Initiation Factors Gene Family AT1G34140 42.000 1.07e-06 46.6