LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa12g0665	ATGCCTACACGAGTCTCCATAGCAGCTGATTCCATTGCTCCCACCCAGGTCATCAGAGATGGCGTGACCTTAGTTTCTCAAGGTGGAGCCTTTGAGCTTGGTTTCTTCAGTCCTGGCAAATCAAAGAAACGCTACCTTGGGATTTGGTACAAGAATATCCCAATTCAGACAGTGTTTGCTTCTGGAGGGCAGGATCTGTATGTGCGCATGGCTGCTTCGGAATTAGAGGAGGAATATGGGCGTAGAAAGAAGTTGAGAATAATAGTTGGTACCACCATTGGTGCGATTTTAGGGATGCTTCTACTTGCAGTTGGATGCTATTTTATCTGCAAAATCCGCAGAAAAAGGGCTGATAAATCCAAAATTAATGAAGAAGATGAACACAACGAAAAGTCTGAGGATGATCTGGACCTCACAGTGCTTGACCTACAAACAATAGCAAGTGCCACTGATAACTTCTCGTTAGAGAACAAAATTGGACAAGGTGGATTTGGTAGTGTTTATAAGGGAAAGTTAGTGAATGGAAAAGTGATTGCTGTGAAGAGACTTTCAAGAAGTTCAGGACAAGGACTGACTGAATTTAAGAATGAAGTAAGACTGATTGCCAAACTTCAGCATCGGAATCTTGTAAAACTTCTTGGCTGTTGCATTCAGGGACAAGAAAAGATGCTGGTTTATGAATATATGCCAAATGGAAGCTTGGACTCTTTCATTTTTGATCAAAACCGAGGTAAGCTGTTGGATTGGCCTAAGCGCTTCCACATTATTTACGGCATCGCTCGAGGTCTTATGTATCTTCATCAAGATTCCAGATTGAGAATTATTCATAGGGATCTCAAAGCAAGTAACATTTTACTTGATGATAAGTTAAATCCAAAGATATCTGATTTTGGCATGACTAAAACTTTTGGTGAAGAACAAACAGAAGGCAATACAAATAGAGTAGTCGGTACCTACGGCTACATGGCACCCGAATACGCATCAGATGGGCTATTTTCTATAAAATCTGATGTTTTTAGTTTTGGTATTTTGGTCATGGAAATAATATATGGGAAGAGAAATAGAGGATTTTACAATGCAGATCAAACTCACAACCTTATTGGTCATGCATGGTTATTGTGGAAAGAAGGGAAGGCTTTAGAATTGATAGACAAAAACATAGAGAAGTCGTATGTTGTATCAGAAGTAATGCGTTGCATCCATGTGAGTCTGTTGTGTGTGCAACAACATCCAGAGGACAGACCCAACATGTCATCTGTTGTTCTGATGTTGGGAAGTGAGAATGAATTAAATGAACCTAAACAACCTGGTTTTTTCCGAAGGAGGGTTTCATCAGAAGCAAATTCATTATCAAGGCAGATGCAATCTGACTCCACAAATGAAGTAACCGTGACACTATTAGAAGCTCGATGA	1413	0.4006	MPTRVSIAADSIAPTQVIRDGVTLVSQGGAFELGFFSPGKSKKRYLGIWYKNIPIQTVFASGGQDLYVRMAASELEEEYGRRKKLRIIVGTTIGAILGMLLLAVGCYFICKIRRKRADKSKINEEDEHNEKSEDDLDLTVLDLQTIASATDNFSLENKIGQGGFGSVYKGKLVNGKVIAVKRLSRSSGQGLTEFKNEVRLIAKLQHRNLVKLLGCCIQGQEKMLVYEYMPNGSLDSFIFDQNRGKLLDWPKRFHIIYGIARGLMYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGMTKTFGEEQTEGNTNRVVGTYGYMAPEYASDGLFSIKSDVFSFGILVMEIIYGKRNRGFYNADQTHNLIGHAWLLWKEGKALELIDKNIEKSYVVSEVMRCIHVSLLCVQQHPEDRPNMSSVVLMLGSENELNEPKQPGFFRRRVSSEANSLSRQMQSDSTNEVTVTLLEAR	470

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa12g0665	470	Pfam	Domain of unknown function (DUF3403)	428	470	IPR021820	GO:0004674
	Bisa12g0665	470	ProSitePatterns	Protein kinases ATP-binding region signature.	159	181	IPR017441	GO:0005524
	Bisa12g0665	470	Gene3D	Transferase(Phosphotransferase) domain 1	229	439	-	-
	Bisa12g0665	470	CDD	STKc_IRAK	159	424	-	-
	Bisa12g0665	470	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	229	432	-	-
	Bisa12g0665	470	SMART	serkin_6	153	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa12g0665	470	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	117	228	-	-
	Bisa12g0665	470	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	274	286	IPR008271	GO:0004672\|GO:0006468
	Bisa12g0665	470	ProSiteProfiles	Protein kinase domain profile.	153	438	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa12g0665	470	Pfam	Protein tyrosine and serine/threonine kinase	154	422	IPR001245	GO:0004672\|GO:0006468
	Bisa12g0665	470	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	78	470	-	-
	Bisa12g0665	470	Gene3D	Phosphorylase Kinase; domain 1	112	228	-	-
	Bisa12g0665	470	SUPERFAMILY	Protein kinase-like (PK-like)	138	445	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa12g0665	Bisa-ChrBisa12	10120220	10123393	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa12g0665	87	441	Receptor kinase-like Gene Family	AT4G23190	53.203	3.27e-134	398

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bisa12g0665		PK_Tyr_Ser-Thr	3.5e-52	CL0016