Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0657 ATGGCGGCTTCAGAGTTAGCCCCTAAAGAGGCGAATCATAGGCGTGAAAGAACTATAATAGGGGTGATAATTGGAAGTACTATTGCCCTAATTTCTGGGATGCTCTTGGCTTTCTGTTACATGCGCAGGAGAAGTATGAATTTGGAAGGAAAAAGAAAAACTAAAGGGATTGTTAGTCTAATCGATTACAAACAAGAAGATCTGGGGCTACCGCTGGTCAACCTATCAGTTATAGCTACAGCCACTGATAACTTCTCAATCAACAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTACATTTAATGATGGGCAAGAAATAGCAGTGAAAAAGCTTTCAAGTAGTTCTGGGCAGGGGATAGATGAATTCAAGAACGAGGTAATACTAATAGCCAAACTTCAGCATCGTAACCTTGTAAAGCTTCTCGGATGTTGCATTCAAGATGAGGAGACGTTGCTGATATACGAATACATGCCGAATAAAAGCTTGGATTCTTTCATTTTTGATGAAACACAAGGAAAGCTTTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGCATTGCTAGGGGATTACTATACCTTCATCAAGATTCTAGGCTGAGGATTATACACAGAGATCTCAAAGCAAGTAATGTTTTGCTGGACAGTGAGATGAATCCGAAGATCTCAGACTTTGGTTTGGCTAAATCTTTTAAGGGTGATCAGAGCAAAGGAAATACAAGAAGAGTAGTAGGGACCTTTGGATATATGGCCCCAGAATACGCTGTCAATGGACGCTTTTCGGTGAAATCCGATGTATTCAGCTTTGGGATTTTGTTGCTTGAGATTGTAACAGGAAAGAAAAATAGAGGGTTCTACTTTCCAAATGACAACATTAACCTAATTGGACATGCATGGGATTTATGGAAAGAAGGAAGGGCTTTGGAATTGGCGGATAAATGGCTGAGGGAGTCGTGCAATCTGTCTGAAGTGATGAGGAGAAGTATGAATTTGGAAGAACAAAGGCAGTTTTGTGTATACCATCTTGCTAAGTTGACATTATTTGAAGAGCTGGTGAAAAAGGAAGGATGTGGGAGAAACAAAGATAAAGATTTAAGCCATATGCAAAATCCAGAACACACTCCATTATAG 1143 0.4016 MAASELAPKEANHRRERTIIGVIIGSTIALISGMLLAFCYMRRRSMNLEGKRKTKGIVSLIDYKQEDLGLPLVNLSVIATATDNFSINNKLGEGGFGPVYKGTFNDGQEIAVKKLSSSSGQGIDEFKNEVILIAKLQHRNLVKLLGCCIQDEETLLIYEYMPNKSLDSFIFDETQGKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDSEMNPKISDFGLAKSFKGDQSKGNTRRVVGTFGYMAPEYAVNGRFSVKSDVFSFGILLLEIVTGKKNRGFYFPNDNINLIGHAWDLWKEGRALELADKWLRESCNLSEVMRRSMNLEEQRQFCVYHLAKLTLFEELVKKEGCGRNKDKDLSHMQNPEHTPL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0657 380 SUPERFAMILY Protein kinase-like (PK-like) 66 327 IPR011009 -
Bisa12g0657 380 SMART serkin_6 85 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0657 380 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 161 339 - -
Bisa12g0657 380 ProSiteProfiles Protein kinase domain profile. 85 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0657 380 Gene3D Transferase(Phosphotransferase) domain 1 161 357 - -
Bisa12g0657 380 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 51 160 - -
Bisa12g0657 380 Pfam Protein tyrosine and serine/threonine kinase 86 286 IPR001245 GO:0004672|GO:0006468
Bisa12g0657 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bisa12g0657 380 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 330 - -
Bisa12g0657 380 Gene3D Phosphorylase Kinase; domain 1 45 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0657 Bisa-ChrBisa12 9878597 9886347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0657 19 330 Receptor kinase-like Gene Family AT4G23230 55.591 1.13e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0657 PK_Tyr_Ser-Thr 5.2e-49 CL0016