Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0655 ATGCTTATTAATACCACTGGGCTTCCTCAGCTAGTAATCACACAAGGAGGTGGTATAATAAATAGAGTAGGATCATGGAATGGGGTTGGTCTCACAGGAAATGCTGAATTGAATACCATTACATTCTTGAAATTTTTTTTTGAGCTAAGTGAAGATGAAGTCTTCTACAGATATCAAGTCCTGAATAGTTCAGTTCTAACGAGAGCCATGATCTCCCCACAAGGCTATCTATTACGGTATACCTGGTCTTCGCAGACAAATAGATGGAATCTTTCATTTTCTAGCCAGTTTGGTCAATGTGAGATCTATGCCTCGTGTGGTGCAAACACCAACTGCTACGTCAATAGCTCTAAAAATTGTGAATGCTTGAGAGGATTCACAGCAAGTGAGGAAGATATGACAGTGAACAATCGCACTTTGGGAAAGAAGAAGATTGCAGGAATTATGGTCGGTTGTATTATATTCATCATGGGCATAGTAGTACTCGGATTGACCCTATGGATTCAGAAGACCAAACTTACACAGCCAGGAACAAGAAGTTATTGGAAGAACAAGAGGAACAAGGAAGACTTTGATTTACCGATATTTGCATTTTCAACAATCTCTAATGCCACGAATCAATTTTCAGAAAGTAACAAGCTAGGACAAGGTGGCTTTGGGCCAGTATACAAGGGAATACTAGCAGATGGGCAGGAGATTGCAGTGAAGAGGCTTTCCGAAACTTCAAAACAAGGAATGGATGAGTTTAAAAATGAAGTCTTGTTGATTGCAAAACTCCAGCACCGAAACCTCGTAAAGCTTCTTGGTTGTACTATTCAACAAGATGAAAAGTTGTTGATCTATGAATTCTTGCCCAACAGAAGCTTAGACTACTTTATTTTTGACTCAGTAAAAAGCAAGCTATTAGATTGGGCCAAACGATTCCAAATTATTGATGGGATAGCTCGAGGACTCCTCTATCTTCATCATGACTCGAGATTGATAATCATCCATAGAGATCTCAAAGCAGGCAACATTCTTCTTGATAAGAACATGAGTCCAAAAATATCTGATTTTGGTTTGGCTAGAACTTTTGGTGGAGATGAAGTTGAGGCCCACACAAATAGAGCAATGGGAACATATGGTTATATGCCTCCAGAATATGTAATGCATGGAGATTTCTCTATCAAATCTGATGTCTATAGTTTTGGTGTGATTGTACTAGAGATAATCAGTGGAAGGAAGATTAGGGGATTTTGTGACTCTCATCATCATCTTAACCTTCTCGGACACGCATGGAGACTATGGATTGAAGCAAGGCCGATAGAGCTGATGGATGAATTGCTGCATGATTCAGCCACAATAACTGAAGTATTAAGATGTATTCAAGTGGGATTGTTGTGTGTACAACAAAGACCAGAGGATAGGCCTAACATGTCAACGGTGGTTTTGATGTTGAATGGTGAGAAATTATTGCCTAAGCCAAGGCAGCCTGGGTTCTATACAGGAAAGGATAATCCAAGTTCAACCCAGATAGATTCTACTACAAAGAGTTGCCAAGAGTGTTCGGCAAATGAAATTTCCTCTTCGTTGTTTGAGGCAAGATAG 1587 0.397 MLINTTGLPQLVITQGGGIINRVGSWNGVGLTGNAELNTITFLKFFFELSEDEVFYRYQVLNSSVLTRAMISPQGYLLRYTWSSQTNRWNLSFSSQFGQCEIYASCGANTNCYVNSSKNCECLRGFTASEEDMTVNNRTLGKKKIAGIMVGCIIFIMGIVVLGLTLWIQKTKLTQPGTRSYWKNKRNKEDFDLPIFAFSTISNATNQFSESNKLGQGGFGPVYKGILADGQEIAVKRLSETSKQGMDEFKNEVLLIAKLQHRNLVKLLGCTIQQDEKLLIYEFLPNRSLDYFIFDSVKSKLLDWAKRFQIIDGIARGLLYLHHDSRLIIIHRDLKAGNILLDKNMSPKISDFGLARTFGGDEVEAHTNRAMGTYGYMPPEYVMHGDFSIKSDVYSFGVIVLEIISGRKIRGFCDSHHHLNLLGHAWRLWIEARPIELMDELLHDSATITEVLRCIQVGLLCVQQRPEDRPNMSTVVLMLNGEKLLPKPRQPGFYTGKDNPSSTQIDSTTKSCQECSANEISSSLFEAR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0655 528 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 88 524 - -
Bisa12g0655 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Bisa12g0655 528 SUPERFAMILY Protein kinase-like (PK-like) 192 479 IPR011009 -
Bisa12g0655 528 ProSiteProfiles Protein kinase domain profile. 208 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0655 528 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 284 487 - -
Bisa12g0655 528 CDD STKc_IRAK 214 481 - -
Bisa12g0655 528 Pfam S-locus glycoprotein domain 22 128 IPR000858 GO:0048544
Bisa12g0655 528 MobiDBLite consensus disorder prediction 488 510 - -
Bisa12g0655 528 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 174 283 - -
Bisa12g0655 528 Pfam Protein tyrosine and serine/threonine kinase 211 476 IPR001245 GO:0004672|GO:0006468
Bisa12g0655 528 Gene3D Phosphorylase Kinase; domain 1 181 283 - -
Bisa12g0655 528 Gene3D Transferase(Phosphotransferase) domain 1 284 486 - -
Bisa12g0655 528 SMART serkin_6 208 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0655 528 MobiDBLite consensus disorder prediction 495 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0655 Bisa-ChrBisa12 9836636 9839124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0655 128 505 Receptor kinase-like Gene Family AT4G23190 50.515 6.95e-128 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0655 PK_Tyr_Ser-Thr 7.1e-46 CL0016