Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0652 ATGGCATCTCAAAACCCAGTAGCCAATTTCCAAGATTACCTGTCCATTATGGCCAACAAGGTGGGTGGAGATGGCCTAATAGACGAACACGAACTACGAAATAGGTTTGATCTATTGATGGATTCTGATAAAGGGGTCATCACCTTCGACAGCCTCAAGAGGAATTCTGCGTTGTTGTCACATCCTCAACATTTACTTCATTTTCTGATGTTGGGTTTGCTTCAAAATCCTAACTTTACCCGTGAACTGGTCATGATTCCGTCCAAATTATCGAAGCAAATTTGGCCTGAGAGAATGGAGCTTCGACACTGGCAAGCGATGACAAATCTTTTTCGAGTGTTTCTCATTACCAGCTTTTTTTGGTTCTTTCATACTTCAAGTGCAGCTGACTACATAACCCGCAATCAGTCAATTACTGAAGGTAGGAGCTTAATTTCTGAGGATGAAAGTTTCGAATTGGGGTTCTTCAGTCCAGGTAGTTCTGCAAATCGATACTTGGGAATATGGTATAAGAACATCCCTGTTAGAACTGTTGTCTGGGTTGCCAATCGAGGTAGTCCAATCAAAGCCAGGTCTGGCATGTTGAGTATAGATGCAGAGGGAAACATCGTACTTCTTGGTCAGAACGAAACTGCTGTTTGGTCGGCAAACCCCAGAAGAAAGGTCCTGAATCCAATTATTGAGCTTTTAGGTTCTGGAAATTTAGTACTAAGAGATGAGAAAGACAAGAACCCAGAAAATTACTTGTGGCAGAGCTTTGACTATCCTTGTGACACATTGTTACCAGGAATGAAAGTGGGATGGGATCTAAAGACCGGTCTGAACTGGAGTCTATCTTCTTGGAAGAACTGGGACGACCCTTCTCCAGGAGACTTTGCTTGGGGTCTTGGGCTTAAAGGTTACCCTGAAATGGTGATGTGGAAGGGCTCATCAGAGTACTACAGAAGTGGCCCCTGGAATGGCCTACGTTTTGATGGTGCCCCAGAATTAAAGATCAATCCTCTTTTTGGGTACAAGTTTGTGTCCACTGAGGATCAGATGTATTATACATATTACCTTAGGAATGAGTCAATGATTTCAAGAATTGTCATGAACCAAAGCACTTATACTCGGCAACGCTTCATATGGATTGAAGAAGCTCAAAGTTGGAGGCTTTATGCATCTGTGCCAAGAGACAACTGCGACCATTATAATACTTGTGGTCCTAATGGAAATTGTGTCATGGGTGAGTCTCCAGTTTGCCAGTGTTTGACTGGGTTTAAACCAAAATCACCACAGAACTGGGACATGATGGACTGGACCAAAGGATGTGTGCGCAATCAACAATTCAGCTGCCAGGATAAGAATGAGGATGGATTTGTGAAATTTAGTGGTCTGAAATATCCAGATTCTACAAATGCTTGGGTTAATGAGAGTATGAGTCTTCAGGAATGCAGGGAAAAGTGCTTAAGAAACTGTTCCTGTACAGCATATGCAAATTCAGATATCAGAGGAGGAGGTAGTGGATGTCTGTTGTGGTTTGGTGACCTCATGGATATCAGACAGATGTCTGGTGATGATCGGGATCTATATATTCGAATGAAAACTCCTGTAATAGCTGTGGAAGATGACCACAAGAAGAAGTTGGCGGCAATAATCATCATTGTTCCCACAGTTGTTCTGATAATTTTGGCACTCTCTTACATTGGTAAGAGCATAAAAAAGATCAGAGAGGAAACAGAGAACAACTTGATGGCACAGAATAATGATGAAGGCCAGCAAGAAGATTTGGAGCTCCCTTTCTTTGACCTTGCCACAATTGTCAAAGCAACTGATGACTTCTCGATCAACAAGAAGCTGGGACAAGGTGGATTCGGGACTGTATACAGGGGTACACTAGTGGATGGAAAAGAAGTTGCTGTGAAGAGGCTTTCACAGAGTTCTGGACAAGGGCCGAATGAATTTAAGAATGAAGTGATATTAATTTCGAAGCTTCAGCATCGAAATCTTGTTAGGCTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTTGTCTATGAATACATGCCCAACAAAAGCCTAGACTCCTTCATCTTTGATCATGTAAAAGGTAAAATTTTGGATTGGTCTAGGCGCTTCAACATTATTTGCGGAATTGCTCGGGGACTTTTGTATCTTCATCAAGATTCTCGGTTGAGGATCATACATAGAGATCTTAAAGTAAGTAATATCTTACTTGACAATGAGTTGAATCCAAAAATATCAGATTTTGGCATGGCTAGAACCTTTGGAGGTGATCAGACTGAAGGAAATACAAACAGGGTAGTTGGAACATATGGTTATATGGCACCTGAGTATGCCATTCATGGACTATTCTCAGTAAAATCAGATGTCTTTAGTTTTGGTGTGTTACTGCTGGAGATAGTAAGTGGAAAGAAGAACAGAGGATTTTCCCATTCAAATCAGAATCTTAACCTTATTGGACATGCATGGAGATTTTGGAAAGAAGGAAGACCATTAGAGTTGATTGATTCATGCTTGGAGGATTTATTTGTTATGTCAGAAGCGTTGCGTTGCATCCATATCAGTCTTCTATGTGTCCAACAGCATCCTGAGGATAGGCCAAGTATGTCAACTGTGGCTGTTATGTTGAGCAGTGAGAATGCCTTGCCTGAACCAAAGGAACCTGCTTACATTATCGAGAAGACATTGCCTGAGGTAGATTCTTCTAGCAAGCATCTCTTATCTTCAACAAATGAAATAAGTCTTACCATGATGGAGCCTCGGTAG 2772 0.4159 MASQNPVANFQDYLSIMANKVGGDGLIDEHELRNRFDLLMDSDKGVITFDSLKRNSALLSHPQHLLHFLMLGLLQNPNFTRELVMIPSKLSKQIWPERMELRHWQAMTNLFRVFLITSFFWFFHTSSAADYITRNQSITEGRSLISEDESFELGFFSPGSSANRYLGIWYKNIPVRTVVWVANRGSPIKARSGMLSIDAEGNIVLLGQNETAVWSANPRRKVLNPIIELLGSGNLVLRDEKDKNPENYLWQSFDYPCDTLLPGMKVGWDLKTGLNWSLSSWKNWDDPSPGDFAWGLGLKGYPEMVMWKGSSEYYRSGPWNGLRFDGAPELKINPLFGYKFVSTEDQMYYTYYLRNESMISRIVMNQSTYTRQRFIWIEEAQSWRLYASVPRDNCDHYNTCGPNGNCVMGESPVCQCLTGFKPKSPQNWDMMDWTKGCVRNQQFSCQDKNEDGFVKFSGLKYPDSTNAWVNESMSLQECREKCLRNCSCTAYANSDIRGGGSGCLLWFGDLMDIRQMSGDDRDLYIRMKTPVIAVEDDHKKKLAAIIIIVPTVVLIILALSYIGKSIKKIREETENNLMAQNNDEGQQEDLELPFFDLATIVKATDDFSINKKLGQGGFGTVYRGTLVDGKEVAVKRLSQSSGQGPNEFKNEVILISKLQHRNLVRLLGCCIQGEEKMLVYEYMPNKSLDSFIFDHVKGKILDWSRRFNIICGIARGLLYLHQDSRLRIIHRDLKVSNILLDNELNPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNRGFSHSNQNLNLIGHAWRFWKEGRPLELIDSCLEDLFVMSEALRCIHISLLCVQQHPEDRPSMSTVAVMLSSENALPEPKEPAYIIEKTLPEVDSSSKHLLSSTNEISLTMMEPR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0652 923 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 527 - -
Bisa12g0652 923 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 115 869 - -
Bisa12g0652 923 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 125 253 - -
Bisa12g0652 923 ProSiteProfiles EGF-like domain profile. 390 426 IPR000742 -
Bisa12g0652 923 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 682 - -
Bisa12g0652 923 SUPERFAMILY Protein kinase-like (PK-like) 590 907 IPR011009 -
Bisa12g0652 923 Gene3D - 123 253 IPR036426 -
Bisa12g0652 923 Pfam S-locus glycoprotein domain 314 424 IPR000858 GO:0048544
Bisa12g0652 923 Pfam D-mannose binding lectin 177 282 IPR001480 -
Bisa12g0652 923 ProSiteProfiles PAN/Apple domain profile. 445 529 IPR003609 -
Bisa12g0652 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Bisa12g0652 923 Pfam Protein tyrosine and serine/threonine kinase 608 876 IPR001245 GO:0004672|GO:0006468
Bisa12g0652 923 PIRSF SRK 102 923 IPR024171 GO:0004674
Bisa12g0652 923 SMART blect_4 135 256 IPR001480 -
Bisa12g0652 923 SUPERFAMILY alpha-D-mannose-specific plant lectins 178 287 IPR036426 -
Bisa12g0652 923 Gene3D Phosphorylase Kinase; domain 1 566 682 - -
Bisa12g0652 923 ProSiteProfiles Protein kinase domain profile. 607 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0652 923 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Bisa12g0652 923 CDD B_lectin 135 256 IPR001480 -
Bisa12g0652 923 Gene3D Hepatocyte Growth Factor 444 525 - -
Bisa12g0652 923 SMART ntp_6 448 527 IPR003609 -
Bisa12g0652 923 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 683 886 - -
Bisa12g0652 923 CDD PAN_AP_plant 444 526 - -
Bisa12g0652 923 CDD STKc_IRAK 613 878 - -
Bisa12g0652 923 ProSiteProfiles Bulb-type lectin domain profile. 129 250 IPR001480 -
Bisa12g0652 923 Gene3D Transferase(Phosphotransferase) domain 1 683 889 - -
Bisa12g0652 923 SMART serkin_6 607 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0652 923 Pfam PAN-like domain 445 513 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0652 Bisa-ChrBisa12 9744261 9750886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0652 542 895 Receptor kinase-like Gene Family AT4G23230 56.338 4.35e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0652 PK_Tyr_Ser-Thr 1.1e-49 CL0016