LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa12g0651	ATGTGGTTGAAGGACCGATGTCAAAACGAAGCAACAGGGATGATAGACGATGGTACCTTGCAGGGAACTAAAGTCGACAACGGCACTGACCGGTGGGAAGGCAAATGTGTGCTGACTGGCGGTGATGAACGGAGTCGCACCGATGTGGGTCAGCCTAACTACCACGGGGCACGTTCTGGCTTGGCTGAATCGCTGGACCTAAAAAAAAGTTGTGGCACAAAAGGTTTGAATCGATATTTATCATCATGGGAAGAACTTAATGATCCTTCAAAAGGCAGTTATACTTATCAACTTGATGTGACTGGCTATCCACAGTTCTTTCTAAGGGAGGGTAAGATAAAAAAATTTCGTTTTGGGTCATGGAATGGTGTCAGATTTACTGGGGCATCTCAGATGAAACAAAACCCTCTATATACCTTCAATTTTGTTTCTAATGATAAAGAGATATATTATGAATTTGAGCTTGTTAATGCGTCGGTTCTGTCGAGGATGGTTATGTCTACAGAAGGAAAGCAAGATATTTACATAAGGATGGCCCAAACAGAACTAGAATCTAGTGAAGGGAATAAACTGAAACATAAAGCCAGTATCCGGAAGGAAGCAGCTATAGTCATCGGCTGTGTGCTGTCTGTAGGAGTTCTGATCTTATGCTTAGCCTTCGTCCTGTATAGATGGATGAAAAACAAGGAATTCAGGAAGATGAGAGGTAATTCAGAAAGAGATTCGGGTGCAATTTATGAGTGCCAGGAGGAAGACCTAGAACTACCCTTGTTTCATATGGCTACACTTACTTCTGCAACAAATAACTTTTCATCCAGTAACATACTGGGAGAAGGTGGTTTTGGACCTGTTTATAAGGGCAGGCTGGAAGATGGAAGAGAAATAGCTGTTAAGAGGCTCTCAAGTACTTCTAGGCAAGGACTCAAGGAGTTTAAAAATGAAGTTATCCACATAGCCAAACTTCAGCACAGGAATTTAGTGAAGCTTCTAGGATGCTGCATTCACGCCGAGGAAAGGATGCTAGTCTACGAATACATGCCTAATAAGAGCTTGGACTTCTTCATATTTGATGAAGAAAGGTGCAAGCTACTAGATTGGTCCAAGCGCATTCGTATAATCAACGGGATTGCTCGTGGTCTTCTGTATCTTCATCAAGACTCAAGGCATAGAATAGTCCATAGAGATCTCAAGGCTGGAAATGTTCTGTTAGATGCTGAACTGAATCCAAAAATTTCAGACTTTGGACTGGCTAGAAGCTTTGGAGGGGATGAAAACGAAGCAAATACAAAGCATGTAGTTGGAACATATGGCTACCTCTCACCAGAGTACATAATTGATGGGAATTACTCAACAAAATCTGATGTGTTTAGCTATGGCGTGCTGGTATTGGAGATAGTAAGTGGTAAGAGAAATAGAGGATTCTCTCACGAAGATCACCACTTTAACCTTTTGGGACATGCATGGAGACTATTCAGAGAAGGAAGATGCTTTGAAATAGTTGATGGATCGATCTTGGAGACATTCAATATGTCTGAAGTGCTAAGATCAATTCACGTGGGTCTTTTATGTGTGCAGAGAAGTCCAGAAGATAGACCAAGGATGTTGTCTGTGGTTATGATGCTGAGTAGTGAATCAGTGTTACCTGAGCCTAAGATGCCTGGGTTTTTCACTGAAAGAGATGTGGTAGGTGACAGCTCATCATCCAGCTGCCATAAATCATGCTCAACAAATGATCTCACAATTAGCCAAATCAATCCACGGTAG	1764	0.4195	MWLKDRCQNEATGMIDDGTLQGTKVDNGTDRWEGKCVLTGGDERSRTDVGQPNYHGARSGLAESLDLKKSCGTKGLNRYLSSWEELNDPSKGSYTYQLDVTGYPQFFLREGKIKKFRFGSWNGVRFTGASQMKQNPLYTFNFVSNDKEIYYEFELVNASVLSRMVMSTEGKQDIYIRMAQTELESSEGNKLKHKASIRKEAAIVIGCVLSVGVLILCLAFVLYRWMKNKEFRKMRGNSERDSGAIYECQEEDLELPLFHMATLTSATNNFSSSNILGEGGFGPVYKGRLEDGREIAVKRLSSTSRQGLKEFKNEVIHIAKLQHRNLVKLLGCCIHAEERMLVYEYMPNKSLDFFIFDEERCKLLDWSKRIRIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDAELNPKISDFGLARSFGGDENEANTKHVVGTYGYLSPEYIIDGNYSTKSDVFSYGVLVLEIVSGKRNRGFSHEDHHFNLLGHAWRLFREGRCFEIVDGSILETFNMSEVLRSIHVGLLCVQRSPEDRPRMLSVVMMLSSESVLPEPKMPGFFTERDVVGDSSSSSCHKSCSTNDLTISQINPR	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa12g0651	587	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	105	585	-	-
	Bisa12g0651	587	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	391	403	IPR008271	GO:0004672\|GO:0006468
	Bisa12g0651	587	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	235	345	-	-
	Bisa12g0651	587	Pfam	Protein tyrosine and serine/threonine kinase	273	487	IPR001245	GO:0004672\|GO:0006468
	Bisa12g0651	587	Pfam	Domain of unknown function (DUF3403)	542	587	IPR021820	GO:0004674
	Bisa12g0651	587	ProSiteProfiles	Protein kinase domain profile.	270	547	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa12g0651	587	Gene3D	Transferase(Phosphotransferase) domain 1	346	548	-	-
	Bisa12g0651	587	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	346	549	-	-
	Bisa12g0651	587	SMART	serkin_6	270	541	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa12g0651	587	SUPERFAMILY	Protein kinase-like (PK-like)	253	551	IPR011009	-
	Bisa12g0651	587	Pfam	S-locus glycoprotein domain	116	176	IPR000858	GO:0048544
	Bisa12g0651	587	CDD	STKc_IRAK	276	541	-	-
	Bisa12g0651	587	Gene3D	Phosphorylase Kinase; domain 1	231	345	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa12g0651	Bisa-ChrBisa12	9728728	9737486	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa12g0651	258	587	Receptor kinase-like Gene Family	AT4G11530	54.303	4.75e-125	381

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bisa12g0651		PK_Tyr_Ser-Thr	1.2e-46	CL0016