Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0648 ATGCTCTGGTTGTTTCTGCTCTTCCGTGTAGCATTGAAAACACTTGTGTTCACTGAAAACCATATCCTGTTGTCCATTACCTATAACGAGCTCTACCAAGTCTGTCTCTTGCTTCTGTCCCCTTCTGGGTTGCATGGAAAGCAATTACCTCAAGGTGGACAAGACCTTTTTATACGAGTCCCTGCTTCAGAGCTAGATCTTTTTGAGAATAAAGGTCCCAGGAACATCAACAAGGCTAAGCTTGTAGGAGTTGCAGTTGGTTCTGTAATGTTAAACATGGGCACCATTCTGATAATTTATGGATTGATTACATGTGTATGGAAAAGGAAACTCAAAAAGCCAGGGATGACAAGAGTAAATTACACAAATCCTTACTATAATAAATTAAGAAAGGAAGACATGGATTTACAGACATTTGATTTTTCAGTCATAGCTAAAGCCACTAGCAATTTTTCAAGCACCAACAAGTTGGGAGAAGGTGGCTTTGGACCAGTATACAAGGGTACTCTAATTGATGGGCAAGAGATAGCTGTCAAAAGGCTGTCAAAAGATTCAGGCCAGGGGATGGAGGAGTTCAAAAATGAAGTTGTCTTGATCACCAAACTTCAGCACCGTAATCTTGTGAAGATAATTGGTTGCTGCATCGAAGGAGAAGAGAAAATGTTGATCTATGAATACATGTCCAACAAAAGCTTGGACTACTTTATTTTTGATGAAACTGGAAGCAAGCTGTTGGATTGGACTCTGCGTTTTTGCATTATTAATGGCATAGCTCGTGGACTTGTTTATCTTCATCAAGATTCTAGATTGAGGATTATTCATAGAGACCTAAAAACTAGCAATATATTACTGGATAACAATTTGAATCCAAAAATATCAGACTTTGGCCTTGCTCGAACATTCTGGGGGGATCAAATTGAGGCCAAAACCAACAGGGTAGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGTTCATGGGCATTTCTCTGTCAAATCCGATGTTTTTAGCTATGGTGTAATTGTATTAGAAATAATCAGTGGAAAGAAAAATAGAGAATTTTCAGACCAAGAGCAGTCCCTAAATCTTCTTGGATATGCATGGGGACTATGGAGTGAAGGAAGAGCTTTGGAGCTAATGGATCAAGCATTAGGAGAAAGATGCAATCCATCTGAAGTAATACAATGCATACAGGTTGGCTTGTTATGCGTACAACAAAGGCCAGAAGATAGGCCAAACATGTCATCTGTGGTTCTAATGCTGAATGGTGAGAAATCATTGCCCAACCCAAAGGTTCCTGCTTTCTACATCGAAAGAAATATACCTGAAGCAGATTCTTCCTCAGCAAAATGTAAACTTTCCTCACCAAATGAAATGTCCCTTACAGTGTTCGAAGCAAGATAG 1407 0.3959 MLWLFLLFRVALKTLVFTENHILLSITYNELYQVCLLLLSPSGLHGKQLPQGGQDLFIRVPASELDLFENKGPRNINKAKLVGVAVGSVMLNMGTILIIYGLITCVWKRKLKKPGMTRVNYTNPYYNKLRKEDMDLQTFDFSVIAKATSNFSSTNKLGEGGFGPVYKGTLIDGQEIAVKRLSKDSGQGMEEFKNEVVLITKLQHRNLVKIIGCCIEGEEKMLIYEYMSNKSLDYFIFDETGSKLLDWTLRFCIINGIARGLVYLHQDSRLRIIHRDLKTSNILLDNNLNPKISDFGLARTFWGDQIEAKTNRVAGTYGYMPPEYAVHGHFSVKSDVFSYGVIVLEIISGKKNREFSDQEQSLNLLGYAWGLWSEGRALELMDQALGERCNPSEVIQCIQVGLLCVQQRPEDRPNMSSVVLMLNGEKSLPNPKVPAFYIERNIPEADSSSAKCKLSSPNEMSLTVFEAR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0648 468 Pfam Domain of unknown function (DUF3403) 427 468 IPR021820 GO:0004674
Bisa12g0648 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Bisa12g0648 468 Gene3D Phosphorylase Kinase; domain 1 125 226 - -
Bisa12g0648 468 ProSiteProfiles Protein kinase domain profile. 151 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0648 468 Gene3D Transferase(Phosphotransferase) domain 1 227 432 - -
Bisa12g0648 468 CDD STKc_IRAK 157 424 - -
Bisa12g0648 468 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 54 447 - -
Bisa12g0648 468 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 116 226 - -
Bisa12g0648 468 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 227 430 - -
Bisa12g0648 468 SUPERFAMILY Protein kinase-like (PK-like) 134 447 IPR011009 -
Bisa12g0648 468 SMART serkin_6 151 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0648 468 Pfam Protein tyrosine and serine/threonine kinase 154 420 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0648 Bisa-ChrBisa12 9687277 9690537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0648 65 436 Receptor kinase-like Gene Family AT4G23320 51.715 2.06e-127 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0648 PK_Tyr_Ser-Thr 6.6e-48 CL0016