Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0644 ATGCTTATCATCAAGAAGGAGTCTGAAATATACTGGACTGGCGATGAGCAATCAAATTTTACTTTTCAAAGTTCTAATAATCGAACCTATGTTACAAGGAACCAGGGCTATTTGACTTGGCAAGGGGAATATACTTCTCGACTGGTTCTGGAAGTATCTGGGGAGCTTAACGAGCAATTCTGGTCACAAGCTGCCAAAGAGTGGGTTTCTCCGCAGTCATCCAAATGCGGGAGAAACGCAACATGCGGAAATTTTGGCATTTGTAACCCACAAGCCGCTGACCCTTGTGAGTGTCTCAGGGGTTTTAAGCCGCGCGATGAAGATTCTTGGAAGCAGGGGGACAAATCCGCAGGATGTGTGAGGAAAAAGGAGTTGCTATGCAGCAACGCGAGCATTAGTGGATTGGCGGATAAGTTTTTAAATCTCAGTACAGTGAATTTGCCTCCAAACAGATCGCCTGCCTTCAGAAAGAACAACGCAGAAATATGTGAAGAATCTTGCTCCACCAATTGTTCTTGCGTGGCTTATGCTTACGACTTTTCGGGTCAATGCTTATTATGGCTTGATCAAGTGTTGAATCTGAAAAACATCTCGGTTGATGTTGGAGATGATGATCGGAGACCACTTTTCTTTTTGAAACTCGCGGAGACGAAAGCACCGATTAATCCTGATCATAACTCTAATCAAAGCCGGAAGATGTTACTAGCAATTGTCATAGCTATCGTGTTTGTAGCATTCCTTTCACTAGCCCTATTTGCTTACTATTACCGGAGGAGAAAGCTAAGTGGAAAAGGTAAAAAAGAAGCTCTCAGATTCACTGATGAATATGACAGCGCATTTACTAATTTTCCTCTCATTTTGGCAGGGGAGGATCTGCTATTGTTTGATGTAGGCCTGAGCATGAAAGTTCAGAGGTCAGAGCTTGGTGATCCAGATAAGGTTGCTAAAGTTAACAAGAAGGAAGTGAAACTGCCATTGTTCAGTTTTGCAAGTGTTTCTGCAGCTACTAATAACTTTTCAGCAGAAAATAAGCTTGGCGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAGCTATTGAATGGGGATGAGGTTGCCGTGAAAAGGCTGTCCACAAGATCTGATCCAAACAAACGCAGGATCTTAGATTGGGGAGCTAGGATTTTGATCATTGATGGGATTGCTCAAGGTCTTCTCTATCTTCATCAGTATTCTAGATTCCGAATTATACACAGAGATCTAAAAGCTAGCAACATTTTGCTGGATATCAATATGAAACCCAAAATATCAGATTTCGGAATGGCAAGAATATTTGGTGGTGATGAAATTCAAGCAAATACAAACAGGATAGTTGGCACTTATGGCTACATGTCCCCCGAGTATGCTTTGGAAGGCATTTTTTCAACAAAGTCTGATGTGTTTAGCTTTGGAGTCCTTTTGTTGGAGATAATAACTGGCAGGAAGAATACTGGTGTTTATAACACAAACTCCCTCAATCTTCTTGGATATGCATGGGATCTATGGACTAGTGGTCGAGGAATAGAACTGATGGATTCAGTGCTAGAGGATGCATACATGAAGAAAATGGTGGTGCAAAGATACGTGAACATAGCACTGCTTTGTGTTCAAGAAAACGCAGACGATAGACCCACAATGTTTGATGTTGTGTCAATGCTTGGCAACGACAGTGCAGTTCTGCCTTATCCGAATCCCATTGCTTTCCTAAATGTCAGAGGTGTGAAGATTTCAAAATCAGATGGAAGCTCTCCAGAAAATGTTTCTAGGAATGTTAACACAGCTACTGTCATGGAAGCGAGATGA 1818 0.4208 MLIIKKESEIYWTGDEQSNFTFQSSNNRTYVTRNQGYLTWQGEYTSRLVLEVSGELNEQFWSQAAKEWVSPQSSKCGRNATCGNFGICNPQAADPCECLRGFKPRDEDSWKQGDKSAGCVRKKELLCSNASISGLADKFLNLSTVNLPPNRSPAFRKNNAEICEESCSTNCSCVAYAYDFSGQCLLWLDQVLNLKNISVDVGDDDRRPLFFLKLAETKAPINPDHNSNQSRKMLLAIVIAIVFVAFLSLALFAYYYRRRKLSGKGKKEALRFTDEYDSAFTNFPLILAGEDLLLFDVGLSMKVQRSELGDPDKVAKVNKKEVKLPLFSFASVSAATNNFSAENKLGEGGFGPVYKGKLLNGDEVAVKRLSTRSDPNKRRILDWGARILIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMKPKISDFGMARIFGGDEIQANTNRIVGTYGYMSPEYALEGIFSTKSDVFSFGVLLLEIITGRKNTGVYNTNSLNLLGYAWDLWTSGRGIELMDSVLEDAYMKKMVVQRYVNIALLCVQENADDRPTMFDVVSMLGNDSAVLPYPNPIAFLNVRGVKISKSDGSSPENVSRNVNTATVMEAR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0644 605 Pfam S-locus glycoprotein domain 27 105 IPR000858 GO:0048544
Bisa12g0644 605 CDD PAN_AP_plant 137 215 - -
Bisa12g0644 605 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 381 574 - -
Bisa12g0644 605 SUPERFAMILY Protein kinase-like (PK-like) 321 558 IPR011009 -
Bisa12g0644 605 Pfam Protein tyrosine and serine/threonine kinase 385 558 IPR001245 GO:0004672|GO:0006468
Bisa12g0644 605 ProSiteProfiles PAN/Apple domain profile. 127 210 IPR003609 -
Bisa12g0644 605 Gene3D Transferase(Phosphotransferase) domain 1 379 565 - -
Bisa12g0644 605 ProSiteProfiles Protein kinase domain profile. 241 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0644 605 Gene3D Phosphorylase Kinase; domain 1 312 378 - -
Bisa12g0644 605 SMART ntp_6 134 214 IPR003609 -
Bisa12g0644 605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 367 566 - -
Bisa12g0644 605 SMART serkin_6 339 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0644 605 MobiDBLite consensus disorder prediction 585 605 - -
Bisa12g0644 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Bisa12g0644 605 Pfam PAN-like domain 136 193 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0644 Bisa-ChrBisa12 9620450 9623036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0644 327 591 Receptor kinase-like Gene Family AT4G05200 46.729 3.33e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0644 PK_Tyr_Ser-Thr 2e-25 CL0016