Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0635 ATGACGAAGTCTCCTTCCAGTGACCAAAAGAATGTATTGAAGAAAGGTCCCTGGACTCCAGAAGAAGACCAGAAGCTCATCGATTATATTCAGAAACATGGTCATGGGAGATGGCGAACTCTTCCCAAGAATGCAGGACTTAAAAGATGCGGAAAGAGTTGTCGACTTCGCTGGACAAACTACTTGAGACCAGATATAAAGAGAGGTAGATTCTCATTCGAAGAAGAGGAAACTATCATCCAATTACACAGTGTCTTGGGAAACAAGTGGTCTACAATTGCTGCTAGCTTGCCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACCCACATCAAGAAGAAGCTATTGAAGATGGGGATTGATCCAGTGACTCACTCTCCATGCTTGGATATTCAACACCTCTCTTCCATTCTCAATCCTTCTCTCCACAACTCCCCTCAACTTAATAACTATCCTTCTCTCTTTGGAATGGGAGGTAACATATTACACCCAAGCCTCCTAGGCATGTTCACAGCTCTCTTATCATCATCATCACAAAACCCAGATGTTCTAAACCAAAATCTCCAGCCAAACCAGCTTAATCACTCTATCTTCCAAGCCTTCCAAACCAATCACCAACAAGTCCCTAATGTCCAAGAAAACCAATCAAATCCGATTATTCTGCAAAATTACACTAGTGCCCCTAATTTTGGCCTACCACATTTGGTTCACTATAATGGCCATGGAGGGCAATCTACCAACTTGGAGAATCAGATTTTACCAAACAACGGGGGATCAATGGGGAATTTCAATTTAGGCTCATTATTATCGTACTCCACACCTTCATCTTCTGCTAGCCCCAGCACTTTGAATTCATCAGCATCTTCCACAACATTCGTCAATGGCACTGCAACTGAAGATGAAAGGGACACTTACTGCAGCAACATGTTGATGTATAACATTTCGAATGGCTTAAATATTAGTGACTCTGGACTTTTGTGA 987 0.4184 MTKSPSSDQKNVLKKGPWTPEEDQKLIDYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKKLLKMGIDPVTHSPCLDIQHLSSILNPSLHNSPQLNNYPSLFGMGGNILHPSLLGMFTALLSSSSQNPDVLNQNLQPNQLNHSIFQAFQTNHQQVPNVQENQSNPIILQNYTSAPNFGLPHLVHYNGHGGQSTNLENQILPNNGGSMGNFNLGSLLSYSTPSSSASPSTLNSSASSTTFVNGTATEDERDTYCSNMLMYNISNGLNISDSGLL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0635 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Bisa12g0635 328 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Bisa12g0635 328 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa12g0635 328 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa12g0635 328 Gene3D - 12 68 - -
Bisa12g0635 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Bisa12g0635 328 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa12g0635 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 271 - -
Bisa12g0635 328 MobiDBLite consensus disorder prediction 276 297 - -
Bisa12g0635 328 SMART sant 67 115 IPR001005 -
Bisa12g0635 328 SMART sant 14 64 IPR001005 -
Bisa12g0635 328 FunFam Transcription factor MYB39 70 131 - -
Bisa12g0635 328 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa12g0635 328 Gene3D - 70 117 - -
Bisa12g0635 328 FunFam MYB-related transcription factor 14 67 - -
Bisa12g0635 328 CDD SANT 70 113 IPR001005 -
Bisa12g0635 328 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0635 Bisa-ChrBisa12 9487099 9488480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0635 1 322 MYB Transcription Factor Family AT4G21440 48.870 4.58e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0635 Myb_DNA-binding 1.1e-16 CL0123