Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g0627 | ATGTTATCTTCTACGCCTTCGGCGATAGCGAGGAGCTCGCTCGAAGAAATGCTTGAATCACTTCGGCGGAGAGAAGAAGAGAAGCCGAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCAACCTCGAGAGCTCGGCTTCCCTCAGCAAGACGGTCGTTGCCCGCTAAATTTAAGACTGAATGTGAATATGGTGCGACAGAATGCTTGCCGAATAACTTCAAGGATAAGACCAAGAGGAAAGATGGGGATGTGGGACACAAGAATAAAAGTAATTTTGGGGGCAAGAAGACGATCCAGGACATGGAATCGCCCTACATCGTGACATTGGAAGAGAGTACGAGCGAACCATCTTCATCAGAGGACCCCGTTTCAGCATCTACAGCTTCCGTAGCTACGTCAGGGAAGACTAAGGAATTGGATTGTGATGACAACATTGCTTATAATATCAAAAAGAAACTTCGTATTTGGTGTAGGCAACCAGGAGGACAGTGGGAACTAGGACAGATACAGTCAAATTCAGGAGAGGAAGCTCTTGTTTCACTCTCAATTGGAGCTGTTATGAAAGTTGCAAGATCAGATATTTTTCCGGCTAATCCAGATATTCTAGAGGGAGTGGATGACCTTATACAGCTTAGTTACTTGAATGAGCCCTCAGTTCTTCACAATCTCCAGTTTAGATTTTCTCAGGATATAATTTATAGTAAGGCAGGACCAGTTTTGATTGCACTCAACCCTTTCAAAGACGTCCAGATATATGGAAATGATTATGTCTCAGCTTATAGGCAAAAAAATATGGATAGTCCTCATGTTTATGCCCTGGCAGATGTTGCTTTTAACGAGATGATGAGAGAAGAAGTAAACCAGTCTATTATTATAAGTGGTGAGAGTGGAGCTGGAAAGACAGAGACAGCAAAATTTGCTATGCAATATTTAGCTGCTCTCGGTGGTGGCAGTTGCGGGATAGAAAATGAAGTCCTTCAGACAAATTATATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAACAACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCATGTCGGGGAAGATATGTGGGGCTAAAATTCAAACCTAGAAACTGAATCTTAAAGCAGCCAGTGAATATAAATATCTGAATCAGAGTGACTGCATGACCATTAGTGGCGTTAATGATGCTAAAAAGTTTCATAAGCTGATGAAAGCACTTGATGTTATCCGAATGTCCAAAGAGGATCAAGAGCTAGTCTTTAAGATGATTGCTGCAATATTATGGCTGGGAAATATATCATTCCAAGTAATCGACAATGAAAATCACGTTGAGGTTGTAGATGATGAAGCTGTAACCAGTGCTGCCCAGCTGATGGGTTGCAGTTCCCAGGAGTTAATGATAACTTTATCTACTCAAAAAATCCAAGCTGGCAAGGATACTATTGCCAAAAAATTGACATTGCGGATGGCAACTGACACGAGAGATGGATTGGCAAAATTCATATATTCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTAGAAGTGGGTAAACAACGTACTGGGAGATCCATTAGTATTCTCGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTCTGTATAAATTATGCTAACGAGAGGCTTCAACAACATTTCAATCGGCATCTTTTTAAACTTGAGCAGGAAAACTATGAATTGGATGGCATTGATTGGACTAGGGTAGATTTTGAGGACAATCAAGAATGCTTGGATCTTATTGAGAAGAAACCTCTGGGGTTAGTCTCTCTCTTGGATGAGGAATCAAATTTCCCCAGGGCCACTGATCTATCATTTGCCAACAAGCTTAGACAGCACCTAAATGGTAATCGTTATTTTAAAGGGGAAAGAGGCAGAGCTTTCGGCATTTGTCACTATGCAGGGGAGGTCTTGTATGATACAAATGGATTTCTAGAAAAGAACCGGGATCCGCTGCCTTCTGATTCCATTCAACTCCTGTCATCATGTAGTTGCCAACTGCTGCAGTTGTTCTCCAAATTTCTTAATCAGTCTCAGAAGCAATCAAATTCCTCCCACATAGGTGCACTAGGTTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGAATCAGTTGGAGAACACCACACCTCACTTTATTCGCTGCATAAAGCCAAATGCCAAGCATTTTGCTGGAATATATGATGATGACCTTGTCTTACAACAGCTCAGGTCTTGTGGTGTTTTGGAGGTCGTAAGAATTTCGAGGGCTGGATATCCTACTCAAATGACGCATCAAGAGTTTTCCAGAAGGTATGGGTTCCTGCTTTCTGAGGCCCATGTATCACAGGATCCATTAAGCATCTCAGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTACACGAAACTGTATCTTCGAACAGGGCAGATTGTTGCATTGGAGGATAGGAGAAAACAGGTTATGCAGGGAATACTCGGGGTTCAAAAATCTTTCCGTGGTCATCAAGCTCGCCGAAATCTTTATGAACTTAAGAATGCAGCAGTTACATTACAATCATTTGTTCGTGGAGAGATGGTGAGAAAGAATTATGATACTGGGCTGAAGTCTTTTGCTTCTGAACAGCTTCTGCAGATCCAGGCAATCACACGACTACAATCTGCAATCCGTGGGTGTATGGTTAGAAGGCATGCTAATGCCATGCAAAAGTTGAGGAAAGACCCTAAAAATGCTAAACCCAAGCGAAAGTCACGTTCTAAGATGTCAGAAGTGAAGGATGTATCGATAGAGCAGGTTCAGAACCTGCCTTCAGCTTTAGCAGAACTCCAAAGCCGGGTTCTCAAAGCTGAAGCAACCCTGGAGCAAAAAGAAGAGGAAAATGCTTCATTGAGGGAACAACTAAAACAATTTGAGACAAGGTGGATTGAGTACGAGATAAAGATGAAATCAATGGAACAGAAATGCCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAGGAGCCTTGCTTTAGAGAATTCCACTGGCCAACCTGGAAGACATGATGCTGTGTCACCCTGCTACTATGACTCTGAAGATGCAACTTTGATGGAATCTCGAACACCCGGTAGCAGCACACCTATCAAGTTACCTGGTACTTCGTATGCAGTCAGCAATCTGATGAAGGAATTTGAGCAGAAGAGACAGTCATTTGATGATGATGCCAAAGCTCTGTTTGAGGTTAGATCAGGGAACCCTGTTAGCATGAAACTCACTGAAGATTTTCGGAAACTTAAACATAGGTTTGAGGTATGGAAGAGAGAATACAAGGGTAGATTACGGGAGACAAAATCTAAGCTTATTAGGACAGGGAGTCCAGAAGCAGAAGTTAAATGTCGAAAATGGTGGGGGAAGATTAGTCAAAGAGGGCTATAG | 3489 | 0.421 | MLSSTPSAIARSSLEEMLESLRRREEEKPKDLPPALPARPTSRARLPSARRSLPAKFKTECEYGATECLPNNFKDKTKRKDGDVGHKNKSNFGGKKTIQDMESPYIVTLEESTSEPSSSEDPVSASTASVATSGKTKELDCDDNIAYNIKKKLRIWCRQPGGQWELGQIQSNSGEEALVSLSIGAVMKVARSDIFPANPDILEGVDDLIQLSYLNEPSVLHNLQFRFSQDIIYSKAGPVLIALNPFKDVQIYGNDYVSAYRQKNMDSPHVYALADVAFNEMMREEVNQSIIISGESGAGKTETAKFAMQYLAALGGGSCGIENEVLQTNYILEAFGNAKTSRNNNSSRFGKLIEIHFSMSGKICGAKIQTXKLNLKAASEYKYLNQSDCMTISGVNDAKKFHKLMKALDVIRMSKEDQELVFKMIAAILWLGNISFQVIDNENHVEVVDDEAVTSAAQLMGCSSQELMITLSTQKIQAGKDTIAKKLTLRMATDTRDGLAKFIYSSLFDWLVEQVNKSLEVGKQRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQENYELDGIDWTRVDFEDNQECLDLIEKKPLGLVSLLDEESNFPRATDLSFANKLRQHLNGNRYFKGERGRAFGICHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCSCQLLQLFSKFLNQSQKQSNSSHIGALGSQKQSVGTKFKGQLFKLMNQLENTTPHFIRCIKPNAKHFAGIYDDDLVLQQLRSCGVLEVVRISRAGYPTQMTHQEFSRRYGFLLSEAHVSQDPLSISVAVLQQFNIPPEMYQVGYTKLYLRTGQIVALEDRRKQVMQGILGVQKSFRGHQARRNLYELKNAAVTLQSFVRGEMVRKNYDTGLKSFASEQLLQIQAITRLQSAIRGCMVRRHANAMQKLRKDPKNAKPKRKSRSKMSEVKDVSIEQVQNLPSALAELQSRVLKAEATLEQKEEENASLREQLKQFETRWIEYEIKMKSMEQKCQKQMASLQMSLAAARRSLALENSTGQPGRHDAVSPCYYDSEDATLMESRTPGSSTPIKLPGTSYAVSNLMKEFEQKRQSFDDDAKALFEVRSGNPVSMKLTEDFRKLKHRFEVWKREYKGRLRETKSKLIRTGSPEAEVKCRKWWGKISQRGL | 1162 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0627 | 1162 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 164 | 890 | IPR027417 | - | |
| Bisa12g0627 | 1162 | Gene3D | - | 846 | 892 | - | - | |
| Bisa12g0627 | 1162 | ProSiteProfiles | IQ motif profile. | 843 | 871 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | PRINTS | Myosin heavy chain signature | 529 | 557 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | PRINTS | Myosin heavy chain signature | 287 | 312 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | PRINTS | Myosin heavy chain signature | 233 | 252 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | PRINTS | Myosin heavy chain signature | 582 | 610 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | PRINTS | Myosin heavy chain signature | 330 | 357 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | ProSiteProfiles | IQ motif profile. | 865 | 894 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 72 | 96 | - | - | |
| Bisa12g0627 | 1162 | Gene3D | - | 774 | 841 | - | - | |
| Bisa12g0627 | 1162 | PANTHER | MYOSIN | 196 | 1154 | - | - | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 920 | 946 | - | - | |
| Bisa12g0627 | 1162 | SMART | iq_5 | 841 | 863 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | SMART | iq_5 | 864 | 886 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | SMART | iq_5 | 898 | 920 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 72 | 90 | - | - | |
| Bisa12g0627 | 1162 | Gene3D | Kinesin motor domain | 170 | 373 | IPR036961 | - | |
| Bisa12g0627 | 1162 | Pfam | IQ calmodulin-binding motif | 901 | 918 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | Pfam | IQ calmodulin-binding motif | 867 | 885 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 110 | 131 | - | - | |
| Bisa12g0627 | 1162 | FunFam | Myosin IE heavy chain | 410 | 518 | - | - | |
| Bisa12g0627 | 1162 | FunFam | Unconventional myosin-XIX | 541 | 730 | - | - | |
| Bisa12g0627 | 1162 | Gene3D | Kinesin motor domain | 695 | 773 | IPR036961 | - | |
| Bisa12g0627 | 1162 | CDD | MYSc_Myo8 | 217 | 828 | IPR036022 | - | |
| Bisa12g0627 | 1162 | MobiDBLite | consensus disorder prediction | 16 | 33 | - | - | |
| Bisa12g0627 | 1162 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 414 | 545 | - | - | |
| Bisa12g0627 | 1162 | SMART | MYSc_2a | 197 | 841 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | Pfam | Myosin head (motor domain) | 371 | 828 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | Pfam | Myosin head (motor domain) | 205 | 370 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | ProSiteProfiles | Myosin motor domain profile. | 203 | 840 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bisa12g0627 | 1162 | Coils | Coil | 960 | 994 | - | - | |
| Bisa12g0627 | 1162 | Gene3D | - | 546 | 688 | - | - | |
| Bisa12g0627 | 1162 | ProSiteProfiles | IQ motif profile. | 899 | 928 | IPR000048 | GO:0005515 | |
| Bisa12g0627 | 1162 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 150 | 199 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g0627 | Bisa-ChrBisa12 | 9342634 | 9353828 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g0627 | 1 | 1156 | Myosins gene family | AT5G54280 | 60.631 | 0.0 | 1479 |