Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0608 ATGGGAGTTGCAGAGACAGACCCGTTAGCCCAATTGTGTTTGCCTCCGGGTTTTCGGTTTTACCCGACGGATGAGGAACTTCTGGTTCAGTATCTTTGCCGGAAGGTCGCCGGCCACCACTTCTCTCTCCAAGTCATTGGTGAAATCGACTTGTACAAGTTCGACCCTTGGCTTCTTCCAAGCAAAGCAATTTTCGGAGAGAAAGAATGGTACTTCTTTAGCCCAAGAGATCGGAAGTATCCGAATGGGTCGCGACCCAACCGGGTGGCCGGGTCGGGATACTGGAAAGCCACGGGAACCGACAAAATCATCAGCACCGACGGTCGAAAGGTTGGAATAAAGAAAGCTCTCGTCTTCTACATCGGAAAAGCACCCAAAGGCACTAAAACCAACTGGATCATGCACGAGTATCGCCTCCTCGATTCTTCCCGAAAGCACGGAAGCTCTAGGCTTGACGATTGGGTCCTGTGTCGGATATATAAGAAGAACTCGAGCTCCCAGAAGACTTTGCCTATGGTTCCGACCAACGACTACAGTAACGGGTCGTCTTCCTCATCGTCATCCCACCTCGACGATGTGCTGGAATCGTTGCCGGAAATCGACGACAGGAGCTTCGCTCTGCCAGGTGTGAACTCGCTGAAGGCGTGGCACCAAGACGAGAAGCTGAATTTTCAGAATCTGGGAGTCGGGGATTTAGCAGGCTGGGCTAACCCGACGATTCTGAACTCGGTGGCGGAGTTCGTCTCGGGGAATCAAACGCAGAGCCAATCTCGGGGGATGGTGAACTACAGTTCAATCAATGACATGAGTGTGCCATTGATCCCGCCGATGGCCCACGTGGCGGCGGCCATGCCGGCGGAGGAGGAGGTCCAGAGTGGAGTGAGCAACTCAGGATTTTGCCAGCAGAGTCCGAATGTGTTCGTTAATGACCCGTATGGCTTCAGATGCCCGAGTCACACAATGGGGTTCGATTACCGACAACAATGA 987 0.5309 MGVAETDPLAQLCLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQVIGEIDLYKFDPWLLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTDGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKHGSSRLDDWVLCRIYKKNSSSQKTLPMVPTNDYSNGSSSSSSSHLDDVLESLPEIDDRSFALPGVNSLKAWHQDEKLNFQNLGVGDLAGWANPTILNSVAEFVSGNQTQSQSRGMVNYSSINDMSVPLIPPMAHVAAAMPAEEEVQSGVSNSGFCQQSPNVFVNDPYGFRCPSHTMGFDYRQQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0608 328 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Bisa12g0608 328 FunFam NAC domain-containing protein 72-like 23 167 - -
Bisa12g0608 328 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Bisa12g0608 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 218 - -
Bisa12g0608 328 MobiDBLite consensus disorder prediction 167 192 - -
Bisa12g0608 328 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Bisa12g0608 328 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0608 Bisa-ChrBisa12 8984770 8985975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0608 1 271 NAC Transcription Factor Family AT3G15500 64.384 1.82e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g0608 NAM 3.1e-36 No_clan