Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa12g0584 | ATGTCTGAAATTGAATCGGAGTATAAATTAGAGCAATTTCAGAGTGTTGCAAAGGAAGTTTCCTCTTCTCTTGTCTCTCACAGCGTTTATCTTGGAACTCGTGTAGAAAGAGAGAGCTCGCCGTCCACTTCAGTCACCTCTTCCACATCATCTTCCGGACTTCCTGTTCCAGCAAATGGTGGTTACTGTTCTTCTAAGATGGGCACGAGAATCGGCAGTACGTCGCCGTGGAAGAAAACTTTAATGGCACCTGCATGCTTAGACTCTGATGGGGGACCATCTGTAAAGCAAAACTCCAAATCTATTTCAGCAAATAAAAAAACCAATGGTAGTGACAAGGGCAGCTTTGATTGCAATATTTGCTTGGAATCACCACACGATCCCGTGGTCACTCTGTGCGGTCACCTCTACTGCTGGCCATGCATCTACAGGTGGCTTCAAGTCCAGAGCTCATCTGACGAATCAAGCCAGCCCCCGACATGTCCAATTTGTAAAGCTAACATCTCTCATGCTTCTTTAATCCCACTTTACGGCCGTGGAACATCTTGTCCGGTTTCTGAAGCCAAGAATCCCCAGATGGATCTAAGAGTCCCTCGCAGGCCCCCTCCTTACATCTCAAATGCATCGACTTCTCATCCAGGTCAACAAGCTCATCCAGATTTTCATCACCAGCAATACTTCCCTCACCTTCATGGAGATTATACTGCAATTGGATCACGATATCATGGGGGTGCAGCTATGTCTAGCTTATTTACTCCAATGATCGGTATGTTCAAGGATATGGTCTTCACGAGAATTTTCAGGAGCTCAGGTGCAAATCTGTTTTCTTACCCTTATGTAATTTCTTACCTTCAAAATGGAAATGGCAGTCCTAGGATGAGAAGACAGGAGATGCAGATTGATAAACTGATGGAGGAAGAGATTGAATTGAGTAGGGTGAAGAATGATTCTGAATTCAGAATTAAGATAAATCTCGGCAGTATTGGATAA | 990 | 0.4424 | MSEIESEYKLEQFQSVAKEVSSSLVSHSVYLGTRVERESSPSTSVTSSTSSSGLPVPANGGYCSSKMGTRIGSTSPWKKTLMAPACLDSDGGPSVKQNSKSISANKKTNGSDKGSFDCNICLESPHDPVVTLCGHLYCWPCIYRWLQVQSSSDESSQPPTCPICKANISHASLIPLYGRGTSCPVSEAKNPQMDLRVPRRPPPYISNASTSHPGQQAHPDFHHQQYFPHLHGDYTAIGSRYHGGAAMSSLFTPMIGMFKDMVFTRIFRSSGANLFSYPYVISYLQNGNGSPRMRRQEMQIDKLMEEEIELSRVKNDSEFRIKINLGSIG | 329 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa12g0584 | 329 | ProSiteProfiles | Zinc finger RING-type profile. | 118 | 165 | IPR001841 | - | |
Bisa12g0584 | 329 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 95 | 304 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Bisa12g0584 | 329 | MobiDBLite | consensus disorder prediction | 88 | 111 | - | - | |
Bisa12g0584 | 329 | MobiDBLite | consensus disorder prediction | 35 | 54 | - | - | |
Bisa12g0584 | 329 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 177 | IPR013083 | - | |
Bisa12g0584 | 329 | CDD | RING-HC_AtRMA-like | 116 | 166 | - | - | |
Bisa12g0584 | 329 | ProSitePatterns | Zinc finger RING-type signature. | 133 | 142 | IPR017907 | - | |
Bisa12g0584 | 329 | Pfam | Zinc finger, C3HC4 type (RING finger) | 117 | 170 | - | - | |
Bisa12g0584 | 329 | SUPERFAMILY | RING/U-box | 111 | 170 | - | - | |
Bisa12g0584 | 329 | SMART | ring_2 | 118 | 164 | IPR001841 | - | |
Bisa12g0584 | 329 | MobiDBLite | consensus disorder prediction | 92 | 111 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa12g0584 | Bisa-ChrBisa12 | 8643325 | 8647533 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa12g0584 | 90 | 313 | C3H Transcription Factor Family | AT4G27470 | 40.678 | 1.61e-49 | 164 |