Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0584 ATGTCTGAAATTGAATCGGAGTATAAATTAGAGCAATTTCAGAGTGTTGCAAAGGAAGTTTCCTCTTCTCTTGTCTCTCACAGCGTTTATCTTGGAACTCGTGTAGAAAGAGAGAGCTCGCCGTCCACTTCAGTCACCTCTTCCACATCATCTTCCGGACTTCCTGTTCCAGCAAATGGTGGTTACTGTTCTTCTAAGATGGGCACGAGAATCGGCAGTACGTCGCCGTGGAAGAAAACTTTAATGGCACCTGCATGCTTAGACTCTGATGGGGGACCATCTGTAAAGCAAAACTCCAAATCTATTTCAGCAAATAAAAAAACCAATGGTAGTGACAAGGGCAGCTTTGATTGCAATATTTGCTTGGAATCACCACACGATCCCGTGGTCACTCTGTGCGGTCACCTCTACTGCTGGCCATGCATCTACAGGTGGCTTCAAGTCCAGAGCTCATCTGACGAATCAAGCCAGCCCCCGACATGTCCAATTTGTAAAGCTAACATCTCTCATGCTTCTTTAATCCCACTTTACGGCCGTGGAACATCTTGTCCGGTTTCTGAAGCCAAGAATCCCCAGATGGATCTAAGAGTCCCTCGCAGGCCCCCTCCTTACATCTCAAATGCATCGACTTCTCATCCAGGTCAACAAGCTCATCCAGATTTTCATCACCAGCAATACTTCCCTCACCTTCATGGAGATTATACTGCAATTGGATCACGATATCATGGGGGTGCAGCTATGTCTAGCTTATTTACTCCAATGATCGGTATGTTCAAGGATATGGTCTTCACGAGAATTTTCAGGAGCTCAGGTGCAAATCTGTTTTCTTACCCTTATGTAATTTCTTACCTTCAAAATGGAAATGGCAGTCCTAGGATGAGAAGACAGGAGATGCAGATTGATAAACTGATGGAGGAAGAGATTGAATTGAGTAGGGTGAAGAATGATTCTGAATTCAGAATTAAGATAAATCTCGGCAGTATTGGATAA 990 0.4424 MSEIESEYKLEQFQSVAKEVSSSLVSHSVYLGTRVERESSPSTSVTSSTSSSGLPVPANGGYCSSKMGTRIGSTSPWKKTLMAPACLDSDGGPSVKQNSKSISANKKTNGSDKGSFDCNICLESPHDPVVTLCGHLYCWPCIYRWLQVQSSSDESSQPPTCPICKANISHASLIPLYGRGTSCPVSEAKNPQMDLRVPRRPPPYISNASTSHPGQQAHPDFHHQQYFPHLHGDYTAIGSRYHGGAAMSSLFTPMIGMFKDMVFTRIFRSSGANLFSYPYVISYLQNGNGSPRMRRQEMQIDKLMEEEIELSRVKNDSEFRIKINLGSIG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0584 329 ProSiteProfiles Zinc finger RING-type profile. 118 165 IPR001841 -
Bisa12g0584 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 95 304 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bisa12g0584 329 MobiDBLite consensus disorder prediction 88 111 - -
Bisa12g0584 329 MobiDBLite consensus disorder prediction 35 54 - -
Bisa12g0584 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 177 IPR013083 -
Bisa12g0584 329 CDD RING-HC_AtRMA-like 116 166 - -
Bisa12g0584 329 ProSitePatterns Zinc finger RING-type signature. 133 142 IPR017907 -
Bisa12g0584 329 Pfam Zinc finger, C3HC4 type (RING finger) 117 170 - -
Bisa12g0584 329 SUPERFAMILY RING/U-box 111 170 - -
Bisa12g0584 329 SMART ring_2 118 164 IPR001841 -
Bisa12g0584 329 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0584 Bisa-ChrBisa12 8643325 8647533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0584 90 313 C3H Transcription Factor Family AT4G27470 40.678 1.61e-49 164