Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0579 ATGAGGTCCAGGTCGAGGAGTCGCCGGAGAAGCTGTTTCCGGCCATCGGTTTCTCCAGCTAATACTGAACCCGAACACTTTATGAAGCTCATACTTCCCGAACCCATTCATAGCGAAAAAATGAGAATTCCAAAGGAGTTTATAAGAAGATTTGGGAATGAATTATCTAGTGAGGCAACAATTACTGTTCCAGACGGTCTTGTTTGGAAAATGGGATTGAAGAAATCTGCTGACGATGTTTTGCTTTGCAACGGTTGGCGAGAATTTGTAAAGTACTACTCTATTTGTTATGGATTCTTCTTAGTGTTCAAATATGTAGGAAATTCAAATTTCAATGTGATTATATTTGATACGAGTGCTGCTGAAATTTACTATCCTTGCAAGAATCAGAGTAACAATGAGGAAACTAACTTTGAGAAGCAGCACTCAGAAACAGAGTGGTCTAGGAAAAGGTCCAGACTTGATCATTGTGGTTACGGCAAGACGAGCAAGAGGCCTAAGCTGGAAAATGAAGAAGAAATAATTGATGTAGATGATGTGAATGGGCTGAGTCACAGTAAACCAGGAAAGAATGTAAGTTATAATCCTCATGAGCATTCAAGAAAACATGGGAAAGATGGATCTAGGCAGGGCTCTTCTTCCCAAATGGATAGTATAATGAGAAAAAAACTAAGGGCTATTGAAGCTGCCGAAAAGTTCAAGCCAGAAAATCCTTCTTTCACTGCAATAATAAAGCCATCTCATATGACTTATTGTTACATGGTGAGTTTTCATAAGCTGTGA 783 0.3921 MRSRSRSRRRSCFRPSVSPANTEPEHFMKLILPEPIHSEKMRIPKEFIRRFGNELSSEATITVPDGLVWKMGLKKSADDVLLCNGWREFVKYYSICYGFFLVFKYVGNSNFNVIIFDTSAAEIYYPCKNQSNNEETNFEKQHSETEWSRKRSRLDHCGYGKTSKRPKLENEEEIIDVDDVNGLSHSKPGKNVSYNPHEHSRKHGKDGSRQGSSSQMDSIMRKKLRAIEAAEKFKPENPSFTAIIKPSHMTYCYMVSFHKL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0579 260 PANTHER B3 DOMAIN-CONTAINING 22 231 - -
Bisa12g0579 260 ProSiteProfiles B3 DNA-binding domain profile. 26 119 IPR003340 GO:0003677
Bisa12g0579 260 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g0579 260 CDD B3_DNA 26 117 IPR003340 GO:0003677
Bisa12g0579 260 MobiDBLite consensus disorder prediction 192 208 - -
Bisa12g0579 260 MobiDBLite consensus disorder prediction 179 219 - -
Bisa12g0579 260 SMART B3_2 27 119 IPR003340 GO:0003677
Bisa12g0579 260 Pfam B3 DNA binding domain 28 118 IPR003340 GO:0003677
Bisa12g0579 260 Gene3D - 18 121 IPR015300 -
Bisa12g0579 260 SUPERFAMILY DNA-binding pseudobarrel domain 21 119 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0579 Bisa-ChrBisa12 8553883 8556706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0579 27 249 B3 DNA Binding Superfamily AT3G18990 27.016 1.69e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa12g0579 B3 5.1e-14 CL0405