Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0574 ATGGGTTGCATTTGTTGCAGGCCATCTGCCATTAAGGATAGTAATGAGAGTCCAAGGGACCGTTTATCCAACAAAGCTTCACTGGAATCGCGTGTATCTAGGGCTACTTCATCAAGGAGGGAGGAAGCATATCGAGTGAAGGATAGTTATGATAGTAATGATGGAAGAACTGCCGTGATAGATAAGCAAGTTAATGGCTCAGCTGGATTACACAGTGAGAATTTTGAAAGAAAGAGGGAGAAAATGGAATTCATTGTTGCCCAGCATCCGAAAATCGGTAGTGTTCCTAAAGCCACTGAAGGGGAGCAGGTTGCGGCTGGATGGCCTTCATGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCCCGCCGAGCAGATTCTTTTGAAAAGCTGGATAAAATTGGCCAGGGAACTTACAGCAATGTTTATAGGGCTCGTGATCTTGAACAAAAGAAAATTGTTGCTTTAAAGAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTGCGTAGACTTGATCATCCAAGTGTCATAAAATTGGAAGGCCTGGTTACATCGAGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGCCTTGCGTCACATCCTGGACAGAAATTTACAGAAGCACAGGTCAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCACTGCCATAGCCGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAACCTTTTGATCGACAACAATGGAATATTGAAGATTGCGGATTTTGGTTTAGCTAGTTTTTTTGATCCCAATCAAATTCAGCCACTTACGAGTCGAGTTGTCACTCTTTGGTATCGACCACCAGAGCTTTTACTAGGAGCCACGTGCTATGGTACTGCAGTAGATTTATGGAGTACAGGTTGCATTCTTGCTGAGCTGTATGCTGGCAAGCCTATTATGCCAGGAAGAACTGAGGTTGAGCAGTTACATAAGATTTTTAAACTTTGTGGTTCACCTTCTGAGGATTATTGGAGAAAATCAAAGCTACCTCATGCAACAATATTTAAGCCCCAACAACCCTACAGGCGGTGTGTTCGAGAAACATTTAAGGACTTCCCTGTGCCTGCACTGGCACTCATGGAGACACTTTTGTCCATAGATCCTGCTGATCGGGGAACTGCAGCATCTGCTTTGAAAAATGATTTCTTCACAACAAAACCACTACCTTGTGATCCATCAAGCATGCCAAAGTATCCTCCTAGCAAAGAATTTGATGCCAAACTACGGGATGAAGAAGCTCGGAGACAAGGTGCAGCAGGAAGCAAGGGCCAGAGACATGACCTTGAGAGAAGAGGAGCAAGAGAATCTCGAGCCGTCCCTGCACCTGATGCTAATGCTGAACTGGCTCTGTCATTGCAGAAGAGACAAGGTCAGCCCAATTCTAAGAGCCGGAGTGAGATGTTTAACCCTCATCCTGAAGAAGTAGCTTCAGGATTTCCCATTGATCCCCCTAGGCCATCTCAAGCTGTAGATCCCCAGGTACAGCAACATAAAAGAGCCTCCCATTCAGGTCCCCTGGCTCACCATCCTGCATGGGCGAAAACTGGAAAGAATCAGGATGAAGCTCCAAAGATTTCAGTTGGGGGTGACATATCAACAATGCCACATTTAGTTGCAGCAAGGAGGAGTTTATTGTCTGATGATCACAGAGAAAGGTCCAGAACATCACAAGTCGAGTCTCCAAAGCTAATTAGTAGGTTCCCAGGATCCTTCAAGGAGGTTTCTGAATCATTGATGCAACGGGATCAAAAGCATCATATATGCGGCCCTGTGGATCCTCCTCATAAGGAAGACAGGAGAGTCAGCAACAAAGATCCAGTTCTTGTTGGTTATGGATCAAAGGGTAATAAAATTCATTATTCTGGTCCATTGCTAGTTCCCTCTAGCAACACGGATCAGATGTTGAAGGACCATGATCGCCAAATTCAAGAAGCTTCTAGGCGAGCACGTATGGACAAGGCAAAGATGAGAAGACTCCAAGCTGTAGGTAACCAGATAGCCACCAATTCCCTATTTATTTCTGGTCGCTGA 2127 0.4528 MGCICCRPSAIKDSNESPRDRLSNKASLESRVSRATSSRREEAYRVKDSYDSNDGRTAVIDKQVNGSAGLHSENFERKREKMEFIVAQHPKIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPSVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGQKFTEAQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGATCYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVRETFKDFPVPALALMETLLSIDPADRGTAASALKNDFFTTKPLPCDPSSMPKYPPSKEFDAKLRDEEARRQGAAGSKGQRHDLERRGARESRAVPAPDANAELALSLQKRQGQPNSKSRSEMFNPHPEEVASGFPIDPPRPSQAVDPQVQQHKRASHSGPLAHHPAWAKTGKNQDEAPKISVGGDISTMPHLVAARRSLLSDDHRERSRTSQVESPKLISRFPGSFKEVSESLMQRDQKHHICGPVDPPHKEDRRVSNKDPVLVGYGSKGNKIHYSGPLLVPSSNTDQMLKDHDRQIQEASRRARMDKAKMRRLQAVGNQIATNSLFISGR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0574 708 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Bisa12g0574 708 CDD STKc_CDK9_like 131 415 - -
Bisa12g0574 708 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0574 708 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Bisa12g0574 708 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Bisa12g0574 708 MobiDBLite consensus disorder prediction 483 498 - -
Bisa12g0574 708 MobiDBLite consensus disorder prediction 441 469 - -
Bisa12g0574 708 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Bisa12g0574 708 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0574 708 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
Bisa12g0574 708 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Bisa12g0574 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Bisa12g0574 708 MobiDBLite consensus disorder prediction 441 563 - -
Bisa12g0574 708 MobiDBLite consensus disorder prediction 13 27 - -
Bisa12g0574 708 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Bisa12g0574 708 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0574 708 MobiDBLite consensus disorder prediction 13 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0574 Bisa-ChrBisa12 8510387 8517798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0574 123 472 Core Cell Cycle Gene Families AT5G10270 51.366 1.52e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa12g0574 Pkinase 2.6e-67 CL0016