Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0564 ATGGAGCTTCCCACGCCTCTGTTTGTCGTCTTCTTTCTTTTCAGTCTCACCCTTCTCCCTCACTCTCATGCCCGCAAGTTCTACGTTGGTGGAAAACAAGGTTGGGTCCTGAACCCTTCTGAGAATTATAATCAATGGTCTGGAAGAAACAGATTTCAAGTTAACGACGTTCTGGTGTTTAAGTACAAGAAGGGTTCGGACTCGGTGCTGGAGGTGAACAAGGATGACTACGACAAGTGTAACACGAAGAACCCGATTAAGAAATTTGACGACGGTGATACAGAGTTCACGCTTGACAGATCGGGACCTTTCTTCTTCGTGAGTGGGGAAGATGGGAATTGCCAGAAGGGTCAGAAATTGAGCGTTGTGGTGTTGTCTGTCAGATCCAAACAGCCTCCCAAGCCATCCCCTGGTCCTGGTACTCCTAAAGCTCCTCCTCCCGGCGGAATCGCCCCTGTTTCGCCGTCTCCGACCACCCCCTCTCCCTCCGGCACCCCTCCGTCTCCTTCTCCGGGAGGATCTCCGACAACGCCATCTCCGGCTGCTAATTCTCCGTCGACGTCGTCAACCCCACCCTCTCAGGCACCGGGAGGATCTCCGACAACGCCATCCCCATTTGGGAGTCCTCCCTCCTTGTCACCGGGAGGATCTCCGACAACGCCATCCCCATTTGCGAGTCCTCCCTCCATGGCACCGGGAGGATCTCCGGCAGGGTCGTCTCCGATAAGCAGTCCTCCGGGAGGTTCAGTGGCACCAGCCACAGGTCCAGCTGCTTCTACCCCATCATCATCGTCGTCGCCCTCAATCTCGCCTGTGGCGTCGCCCTCAACCTCGCCTGTGGCGTCGCCGCCGTCGCCTCCGGCCACCACTCCCTCACCGTCGTCGTCGCCCTCATCCTCGCCTTCGGCGTCACCGCCGTCGCCTCCGGCCACCGCTCCCTCATCGTCGTCGCCTGCTGCAGGATCACCAGGTGCGACGCCGGCGTCGAGCCCCGGAGGTTCTTCGTCCTCGTCAACCAATGAAACGGCGCCAGCTGCACCAAGATCATCAGCATGGACCGAATCTCCTTCGAGCTTTTGGATCCTCACAGTCACTATTATGGTCGGTGCTGCTCTTGGTACCATTTTTGGTGTCTACTAA 1140 0.5763 MELPTPLFVVFFLFSLTLLPHSHARKFYVGGKQGWVLNPSENYNQWSGRNRFQVNDVLVFKYKKGSDSVLEVNKDDYDKCNTKNPIKKFDDGDTEFTLDRSGPFFFVSGEDGNCQKGQKLSVVVLSVRSKQPPKPSPGPGTPKAPPPGGIAPVSPSPTTPSPSGTPPSPSPGGSPTTPSPAANSPSTSSTPPSQAPGGSPTTPSPFGSPPSLSPGGSPTTPSPFASPPSMAPGGSPAGSSPISSPPGGSVAPATGPAASTPSSSSSPSISPVASPSTSPVASPPSPPATTPSPSSSPSSSPSASPPSPPATAPSSSSPAAGSPGATPASSPGGSSSSSTNETAPAAPRSSAWTESPSSFWILTVTIMVGAALGTIFGVY 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0564 379 CDD OsENODL1_like 25 125 IPR041846 -
Bisa12g0564 379 MobiDBLite consensus disorder prediction 314 354 - -
Bisa12g0564 379 PANTHER BLUE COPPER PROTEIN 26 217 IPR039391 GO:0009055
Bisa12g0564 379 MobiDBLite consensus disorder prediction 277 313 - -
Bisa12g0564 379 FunFam Early nodulin-like protein 1 24 129 - -
Bisa12g0564 379 Gene3D - 23 129 IPR008972 -
Bisa12g0564 379 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Bisa12g0564 379 MobiDBLite consensus disorder prediction 132 178 - -
Bisa12g0564 379 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Bisa12g0564 379 MobiDBLite consensus disorder prediction 255 276 - -
Bisa12g0564 379 MobiDBLite consensus disorder prediction 128 354 - -
Bisa12g0564 379 MobiDBLite consensus disorder prediction 179 195 - -
Bisa12g0564 379 PRINTS Proline rich extensin signature 179 196 - -
Bisa12g0564 379 PRINTS Proline rich extensin signature 126 147 - -
Bisa12g0564 379 PRINTS Proline rich extensin signature 160 176 - -
Bisa12g0564 379 PRINTS Proline rich extensin signature 198 223 - -
Bisa12g0564 379 MobiDBLite consensus disorder prediction 196 230 - -
Bisa12g0564 379 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0564 Bisa-ChrBisa12 8333690 8334922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0564 1 271 Phytocyanin Superfamily AT4G27520 48.070 2.31e-59 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0564 12 8333690 8334922 Bisa12g0564 12 8333690 8334922 ECH