Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0557 ATGGAACCTGTGGTCCGCACCCTTTCCACTTTCTTTTCTACCTTTTTGCTCCCTATAAACTCCCTCCATTTCATAGCTTCCCAAAATAATAGGTTTTTCTTTCTCATCATCATTCCCAGTTCATTGTCAGCTATTTCAATGGAGGTCAAGAGTATTGCGAGGAAGCAAACATCAACTGAGAAGGAAAGAAAGGATAAAATAATTGAAGAAGTAGTAGATGATGAAGAAGAAGATGAGGATAAAAGTGGTGGTGGTGGTGGTGTTCATGCAGAAGAGGACAAGAAGAAAGGTGGTGGTGGGAGTGGGAGAAGGGGGTCAAGTGGGGGTTGTGGAGTTCCTTCAACTTTCTGTCAGGCAGAGAAGTGTGGCGCTGTTCCAAGCGATGCAAAGCGATACCATCGCCGCCACAAGGTGTGTGAGTTTCATTCCAAGGCGCCCATTGTGATTGTTGCAGGGCTGAGGCAAAGGTTTTGCCAGCAATGTAGCAGGTTCCACGACCTCAGGGAATTTGATGAAGCTAAGAGAAGCTGCCGGAGGCGTCTGGCTGAACACAATGAGCGGCGCAGGAAAAGTGCCACTGAATCTTACAATGAAGGTCATTATAATCCAATGGAAGGCCACTGCAAGCAAGTTGATGACAGAGGAAGAAGAGTTCACCATATGAACATTCAGTCTGGGAGTTCCAGCAGCAAATCTTTCCATATCAGATAA 711 0.4599 MEPVVRTLSTFFSTFLLPINSLHFIASQNNRFFFLIIIPSSLSAISMEVKSIARKQTSTEKERKDKIIEEVVDDEEEDEDKSGGGGGVHAEEDKKKGGGGSGRRGSSGGCGVPSTFCQAEKCGAVPSDAKRYHRRHKVCEFHSKAPIVIVAGLRQRFCQQCSRFHDLREFDEAKRSCRRRLAEHNERRRKSATESYNEGHYNPMEGHCKQVDDRGRRVHHMNIQSGSSSSKSFHIR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0557 236 Gene3D - 113 178 IPR036893 GO:0003677|GO:0005634
Bisa12g0557 236 MobiDBLite consensus disorder prediction 82 100 - -
Bisa12g0557 236 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 85 202 IPR044817 GO:0003677
Bisa12g0557 236 Pfam SBP domain 117 190 IPR004333 GO:0003677
Bisa12g0557 236 ProSiteProfiles Zinc finger SBP-type profile. 114 191 IPR004333 GO:0003677
Bisa12g0557 236 MobiDBLite consensus disorder prediction 53 108 - -
Bisa12g0557 236 MobiDBLite consensus disorder prediction 54 70 - -
Bisa12g0557 236 Coils Coil 167 187 - -
Bisa12g0557 236 SUPERFAMILY SBT domain 115 195 IPR036893 GO:0003677|GO:0005634
Bisa12g0557 236 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0557 Bisa-ChrBisa12 8225737 8226937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0557 93 199 SBP-box Gene Family AT1G53160 62.963 1.71e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa12g0557 SBP 7.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0557 12 8225737 8226937 Bisa07g1162 07 29596832 29598315 ECH
Bisa12g0557 12 8225737 8226937 Bisa12g0557 12 8225737 8226937 ECH