Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0554 ATGGCTGATGCAGCAGGTTTAGCTGAGGCAGCAGGATCAAGATTCAGCTCACTGGAGCTTATTGGACAGGGATCATTTGGAGACGTTTATAAAGGCTTTGACAAGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGACTTGGAAGAATCAGAGGATGAGATTGAAGATATTCAGAAGGAAATTTCTGTTCTGCAACAATGTCGATGTCCATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACAAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCTGTTGCTGACCTACTCCAATCAGGTCCTCCTCTTGATGAAATGTCAATTGCTTGCATTCTACGGGACTTGCTACATGCAATTGATTACTTACACAGTGAAGGAAAAATCCATAGAGACATTAAAGCTGCAAATATATTATTGACTGAGCATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCGTTGGGAATCACGGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCACCCAATGAGAGTTCTTTTTATCATACCCCGAGAGAGTCCACCGCAGCTGGATGAGCATTTTTCTCGTTCCTTGAAGGAATTTGTTTCTTTGTGTTTAAAGAAGGTTCCTGCCGAGAGGCAAAGTGCTAAGGAACTTCTGAAACACCGTTTTATCCGGAGTGCAAGGAAAAACCCAAAGCTTTTGGAGAGAATAAGGGAGCGCCCGAAGTACCAAATAAAGGAAGATAAGGCAACATCTAGAAATGGCCCAAGAGGGACAGGGGAGGGATCTGATACTATGAAGGTGGCAAGAGATATGCGAGGCGAAGAAACTCAAAGACCCAGTAGTCAGGGTAAAACCTTGAAAAATGCTGGTTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTTTCACGTCCACCTCATAGTCCAGCAGCTCTGGTCAGCCAAAGAAAAGCTTCAGAGAGTGGCACTCAAGGGGCCTCTGCCAATAGAAGTAGACTTACTGAATCGCCAGAAACTACGTCTGTAAAAGATGTTAGGGTTCCTCACAGTGATGAGCATAAGGATAATCACCTTGATTATGACGAAATGTCTGGGAATGGGTCAGGAACAGTAGTTATTCGATCTCCAAAAGGGTCACAGCCATCACTGATCCGTGACCATAGCCCCCAGTCTAGCAGCAGCTTTGCTTCTTTTGAAGATGCTTCTACCAGTGGAACTGTTGTTTTACGTGATCAGCTTGACAAATCTGATTCGTCACAGACAATAAGATCCAGACTGGGACTTCAGGAGAGAACTTCAAATGCCTCACTGGAGGATAGTGCTGTAAATCTTGCTGAGGCAAAAGCGGCTATGCAAGCAGGACGGAAAGGGAATGCTCGAGACAGACTTGCGGTAGGAAAGATCAACAATTTGCATGAAAGCAGGAGAGACCAAATGACAAGCAGCTCTGATTCTTCCAGATTATCTCACGAATCCATATATGCACAAAAGGGTATTTCAAGATCGCACCATGCTAGTGATGCTGAAGAAAGTGCCAAAATAATTTCTTCCTCTGTACCGTTGTCAAATTTGCTAATTCCTTCAGTGAAAGAGGCTATTGCTGATGATGATCCTGAAGGGTCAATTGTACAACAAGTTGTCAATTCATTGGTAAACATGGAGGGCACAAACCCTAACTCCTGTGATGTTCTTGTCAAAAAGTTGCTGCAGCTCTTGGCAAGTTCAAAGGAATCTTCCTTGAAGGACCTACAGGAGTTTGCAGGCCAAATATTTGCCAAGTCAGCTTCGGAAGAATCCCAAAATGCGGGTGCAGCGGCTGATGACCGGAAGAGACAGCAGAACAAGGAATTCCATTCACATAGCAATTTAAGCCCACTTGCGAGATTTCTTCTCTCAAGATGGCAAGGACAAGTGTCAAGGGATCTAAATCCAGCTTAA 2085 0.4369 MADAAGLAEAAGSRFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLTEHGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDEHFSRSLKEFVSLCLKKVPAERQSAKELLKHRFIRSARKNPKLLERIRERPKYQIKEDKATSRNGPRGTGEGSDTMKVARDMRGEETQRPSSQGKTLKNAGWDFSIGGSQGTGTFRSVSRPPHSPAALVSQRKASESGTQGASANRSRLTESPETTSVKDVRVPHSDEHKDNHLDYDEMSGNGSGTVVIRSPKGSQPSLIRDHSPQSSSSFASFEDASTSGTVVLRDQLDKSDSSQTIRSRLGLQERTSNASLEDSAVNLAEAKAAMQAGRKGNARDRLAVGKINNLHESRRDQMTSSSDSSRLSHESIYAQKGISRSHHASDAEESAKIISSSVPLSNLLIPSVKEAIADDDPEGSIVQQVVNSLVNMEGTNPNSCDVLVKKLLQLLASSKESSLKDLQEFAGQIFAKSASEESQNAGAAADDRKRQQNKEFHSHSNLSPLARFLLSRWQGQVSRDLNPA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0554 694 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0554 694 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 646 669 - -
Bisa12g0554 694 SUPERFAMILY Protein kinase-like (PK-like) 12 339 IPR011009 -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 517 538 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 417 452 - -
Bisa12g0554 694 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 652 666 - -
Bisa12g0554 694 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bisa12g0554 694 MobiDBLite consensus disorder prediction 386 410 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 277 452 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 363 385 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 307 321 - -
Bisa12g0554 694 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0554 694 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 634 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 322 352 - -
Bisa12g0554 694 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0554 694 Coils Coil 41 68 - -
Bisa12g0554 694 MobiDBLite consensus disorder prediction 277 297 - -
Bisa12g0554 694 CDD STKc_MST3_like 13 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0554 Bisa-ChrBisa12 8165317 8174893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0554 1 691 MAP Kinase Kinase Kinase Kinase AT3G15220 65.007 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Bisa12g0554 Pkinase 1.4e-68 CL0016