Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0550 ATGGCTCCCAGAGACAGGCCCATTTCTCTCGCCGGACCCAACAACACGGCGAACGCCGTGAAGGAGATGCGCTACAGAGGCGTCAGGAAGCGACCCTGGGGGCGTTACGCCGCCGAGATCCGTGACCCGGGTAAGAAGACCCGGGTTTGGCTGGGCACTTTCGACACCGCGGAAGAGGCGGCGCGGGCCTACGACGCCGCCGCCAGGGAGTTCCGGGGAGCCAAGGCCAAGACTAATTTTCCGACTCCGTCTGAACTTTTGAATAACTCTGTCTCTACCCGTAGTCCGAGCCAGAGCAGCACTCTCGACTCTTTGTCTCCGCCGCCGCCTCCCCCTCCTCCGCTGGACCTCACCCTCACCTCACTCTCCTCCGGCGGCGGAGGCATGGGGTTTCCGGTGATCCCCGTGGCTCGCCCGGTTATATTTTTCGACGCTTTTGCGAGGGCGGAGAACATGAGAGGCGTTGGCCGTCGCGAGATGTGCGGGTTTGATCGCTTCCGTCAAGCCGTGGGTGGCGGTGCTCAGAGTGACTCCGATTCGTCGTCAGTCATAGACTACGAGCGTGCTCCGCCACCACGAAGGCTTCTAGATCTTGACCTCAACGTCCCTCCTCCTCCGGAGGTTGCCTGA 630 0.6238 MAPRDRPISLAGPNNTANAVKEMRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPTPSELLNNSVSTRSPSQSSTLDSLSPPPPPPPPLDLTLTSLSSGGGGMGFPVIPVARPVIFFDAFARAENMRGVGRREMCGFDRFRQAVGGGAQSDSDSSSVIDYERAPPPRRLLDLDLNVPPPPEVA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0550 209 MobiDBLite consensus disorder prediction 81 102 - -
Bisa12g0550 209 MobiDBLite consensus disorder prediction 73 121 - -
Bisa12g0550 209 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Bisa12g0550 209 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Bisa12g0550 209 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Bisa12g0550 209 MobiDBLite consensus disorder prediction 170 209 - -
Bisa12g0550 209 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Bisa12g0550 209 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Bisa12g0550 209 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Bisa12g0550 209 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Bisa12g0550 209 MobiDBLite consensus disorder prediction 103 117 - -
Bisa12g0550 209 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 150 - -
Bisa12g0550 209 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Bisa12g0550 209 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0550 Bisa-ChrBisa12 8115493 8116122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0550 11 154 AP2-EREBP Transcription Factor Family AT3G15210 60.897 4.40e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa12g0550 AP2 2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0550 12 8115493 8116122 Bisa07g1148 07 29400256 29400957 ECH
Bisa12g0550 12 8115493 8116122 Bisa12g0550 12 8115493 8116122 ECH