Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0547 ATGGATAGTTACCATCACTTCGATAACAGTGATGCTCATTTGCCTCCCGGGTTTCGCTTTCACCCCACAGACGAGGAGCTCATCACTTTCTACCTCCTCAAGAAGGTTCTAGACAACAGCTTTACAGGAAGAGCCATTGCTGAAGTTGATCTAAACAAGTGCGAGCCATGGGAGCTCCCTGAGAAAGCGAAAATGGGGGAGAAGGAGTGGTACTTCTTCAGCCTACGAGACCGAAAGTACCCAACTGGGCTACGAACTAATAGGGCTACAGAGGCTGGATACTGGAAGGCCACTGGAAAAGATAGGGAGATTTACAGCTCAAAAACTTGCTCTCTCGTGGGCATGAAGAAGACTCTGGTCTTCTACAGAGGCAGAGCTCCCAAAGGCGAAAAGAGCAATTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTATCATTTCCTCCCACGCAGCTCCAAGCATGAGTGGGTCATATCTCGCGTGTTCCAGAAGAATATCTCCTCCTCCGGCAGTACTGCGGGCTCCACTGTGTCTTCTTCTGCCAGTGGCTCCAAGAAGACCACTAGAATGAGCTCTTCTGTTCATATGAGCCTCTACCCTGAACCCAGTTCTCCCTCTTCTGTTTATCTTCCTCCTCTGCTTGACTCCTCTCCTTATCCCACCAGCGCCTCCGCCGCCGCCAACGACCGTGACAGCTGCTCTTACGACGGCAGTACCACCCCAAAGGGGCACGTGTCCTGTTTCTCCACATTTTCTGCATCCGCCGCCGCCAATAGCCCCCTTCCAAATGCAAGTTTCGACCTTGCTCCGCCTCCCTCGACGGTGCCGACGTCTGTAGCTCTCGACCCTTTCGGCCGGTTCCAGAGGACCGTTGGTGTCTCTGCCTTCCCGAGCCTGAGGTCGCTGCAGGACAATCTTCAGCTGCCATTCTTCTTCCCTCCGGCCGCAGTTCATGGAGGCTCCAGTGGTGACATGAACGGATGCAGCTGGACCATGCCGGAGGAGCAGACGGTGGCAGACGGTGGTTCCGGCATGACATTGTGTCCCTCCGAGCTTGATTACATGTGGGGCTACTAG 1083 0.5392 MDSYHHFDNSDAHLPPGFRFHPTDEELITFYLLKKVLDNSFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLPRSSKHEWVISRVFQKNISSSGSTAGSTVSSSASGSKKTTRMSSSVHMSLYPEPSSPSSVYLPPLLDSSPYPTSASAAANDRDSCSYDGSTTPKGHVSCFSTFSASAAANSPLPNASFDLAPPPSTVPTSVALDPFGRFQRTVGVSAFPSLRSLQDNLQLPFFFPPAAVHGGSSGDMNGCSWTMPEEQTVADGGSGMTLCPSELDYMWGY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0547 360 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Bisa12g0547 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 209 - -
Bisa12g0547 360 FunFam NAC domain-containing protein 100-like 23 170 - -
Bisa12g0547 360 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
Bisa12g0547 360 MobiDBLite consensus disorder prediction 169 189 - -
Bisa12g0547 360 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Bisa12g0547 360 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0547 Bisa-ChrBisa12 8090852 8092595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0547 4 360 NAC Transcription Factor Family AT5G53950 54.780 2.00e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g0547 NAM 1.3e-40 No_clan