Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0541 ATGCGATTGTCGTCCGCATCCGGTTCGTCATTGGAACAGAGGAGGATTGATCGATCGGCGTCGCGGCTTCGGAAGAAGCATAAGAGGTTGGACGCGATATGCGAAAAGGAGTATAATCGGAACCATAGTGAATTGAATGAGGATGATGTTGGGGCTGGTGCTATGGGCGCTGATACAGAGCTTCGCCGCAGCTCCCGGGTGCGGCGAGCTCCAGTTGTGCTGGATGCCTCTCCTCCTCCCCCAAAGAAACGGCGGAGGTTAGGTAAGGACGTAATGCTGAGGGGTGTGAGGGATGTCGAGAGTCCAGGAAGCGTAAATCAGAGTCCCGGTAAGGTAGAGAGTCTAGGAACATGGAGTTCCAGGTTGAGATCCAGTGTTAAAAATGTAAGTTTCAAGGTGAACGGGGAGAGGGAATCGCCGAGAGGGAAAAGGAAGCTGTTTGAGGATATGGATGAAAACAAGGACGATGGGAAAGTGGAGGTTCTAGAGATTAATAAGAAAGAGGAACTGGAAGGTGGGATGCCAAAAATCGTCAAGTCAAAAAGACCGGGGAGAATCAAAGCAACAAAACATGCAGAAGGGCATAAACATAATGAGTCCCATGGGACTAAGGATGAGAGCAAGAGTCAAGTGGAGCTTAATTTGAACCAGGATGAGGAGAATGCTTCAATTTCAGAACCTAAATTGACTGGTGGGAATGTAATAGAAATAGTTGATGGAAATGCTCCTCCTACCATAGGGACCAGTGAGAGACACATAACTGATAATTTGCAGTTAGAGTTGGTTAATGGCAATGTTGAACTGTCTCCTGTGAAACATGTAGATAAACCAGTTAATCAGTTAGAGAGTGTGAATGAATCTGAAAATGGAAGGGATGCTGAAGAAATTGTTGGAAATGTGACAAAACAAGTAGAAAATGAAGGATCTGTTGATAAGGAATTTGAAATTGATGAAAAGACATTGCAAGATGAAAATATTGTAAAGACAGACAAGCCCAAACAAGCTTCAAGTGACATGACTGGCCAACCACGTATTAAGGAGGGCAGAAGGTGTGGTTTGTGTGGGGGAGGAACTGATGGTAAACCTCCAAAAAGGTTAGTTCAGGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGTTCCTCAGCTTCTGAGGAGCCTAATTATGATATTTGGGACGGTTTTGGCGATGAACCTGGCTGGCTTGGGCCTCTCTTAGGTCCTATTAATGATCGCTATGGTATTGCTGGTATTTGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGCAGAGGAAGAGCTTTGAAGTGCACACGTTGTGGGAGGCGAGGGGCTACCATTGGTTGTCGTGTTGATCGGTGTCCAAAGACATATCACTTGCCTTGTGCACGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGTACTGATCATCGGCATCTCTTCCAACCTCATGGTAGTCAATATTTTGCCCGGATAAAGAAGTTGAAGGCTAGAAAAATGAAGTTGGAGATGAGAAAGCTTTCAAATGATGCTTTGAGAAAGGATATTGAAGCAGAAGAGAGATGGTTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAATAAGAGGCTTCATCGTGATTTATTAAGAATAGCTCCCGTGTACATTGGTGGTCCTGACTTTGACAACGAAAAATCGTTTCAGGGTTGGGAATCAGTTGCTGGGCTTAAAGATGTCATCCGATGCATGAAAGAAGTTGTCATTTTACCTCTGCTCTATCCTGAGTTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGTAAAACTCTAGTAGTTCGGGCACTGATAGGTGCATGTGCTCGTGGTGATAAACGGATTGCATATTTTGCCCGTAAGGGTGCAGACTGCTTGGGGAAATATGTTGGTGATGCTGAGCGCCAACTAAGACTACTATTCCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGATTGGCACCTAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTCTGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGTCCTGATGCTGTTGACCCAGCACTTAGGCGCCCTGGAAGATTTGATCGGGAAATTTACTTTCCTTTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACACACAGGTGGCCAAAACCAGTTACTGGATCCTTACTTGAGTGGATTGCAAGAAAAACTCCTGGCTTTGCTGGTGCCGATCTCCAGGCTCTCTGTACCCAAGCTGCCCTTAATGCTTTGAAGAGAAACTTTCCATTACAAGAAGTGCTGTCTGCAGCTGCAGAGAAAAATTCTGGTTGTAAGCGCCTTCCTCTTCCGTCCTTTGCTGTGGAGGAGAGGGATTGGTTGAAGGCTCTATCATGTTCACCACCACCATGCTCCCGAAGGGAAGCTGGAAATGCTGCTAATGACGTAGTATGTGCCCCTCTTCCCCTCCACCTTATTCCTTGTTTGTTGCGGCCATTATGCACTCTACTTGTATCTCTTTATCTTGATGAACGCCTATGGTTGCCGCCTCCCATATCTAAAGCTGCGACAAGGATTAAGAATGTGATTATTTCTGCTCTGCTCAAAAAGAAAATGTCTATTGATCACTGGTGGTTGCATATTGATGATTTTCTTCAAGACGCAGATATTGCTGCCGATGTAGAGAGGAAGCTCACTTGTTCTGGCATTTTATCTGCAAATGATGGCTTCGCTGGTTTTAATGATCTTGATGATAGCAATGATAACTGGGAGAAATTAGAACCTTCCATAAAGCATCATGTTGGCACTTCCAGTGGTTCATTGTCAAATATGTCATTTGCATTGACTAACAAATCAGGGTTTCGGATATTAATAGCTGGAAATCCCAAATCTGGTCAAAGGCATCTTGCATCCTGCCTTCTTTACTGCTTTGTTGGTAATGTTGAAATGCAGAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATGCAGTGCAAGGGATTGCACAAATATTATTGAAATGTGCTAGCGTGCAATCATGTGTAGTATTCATGCCAAGAATTGATCTTTGGGCTGTGGAAACTCGTTTTCGAGTTGCTGAAAATTCTGATCACTGCTCCACAAATCATCAAATTCCTGAGATGGAGAAGTCTTCTGACAGACAGAGCCTAGATTTTGAAAAGCAAAATGAGTTCAATCCAAAGAAAAACAAATCAACAAAGATGGCCAAGGGCCAAGCAAGCACAAGGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTTGAGTCCATAGGTGTATCCACGTCCTTGATGATTCTGGCTACATCAGAAGTTCCGTATCCAGAACTTCCAAGTAAAGTGAGGGATTTCTTTAAGAGTTACCAATCAAACAGCAGCCATTCTACTTCTTTGGTGCAAACAGTGCTTCGTTTTCCGCTGCAGATTGATGGGAATTTTGATCATGATGTGATGATCAATCTATCTACAGTGGAGTTGTTGAGAAATGTAACTGAGCAGCTGGTTCAATTGATCCATCGAAGATCTCATATCCATATTGGTGTCCAAAAAGGGTACAGAATCTATGATTCAGAGGAAGATTGTAAAGATAGGGCATGTCAGGAAAAAGATAATGGATCAGCCAATGAAGATATGGCTAAAATCCAACTTTCTGAACCCTCTACTAAAGTTCCATCACCACCTCACAGTAGGTTGCTGAAGGGAAAGTCAACCCTGTTGTTAGCAATATCAACATTTGGCTATCAAATTCTTCGGTTCCCTCATTTTGCTGAACTTTGTTGGTTCACATCAAAACTTAGAGAAGGTCCTTCTGCTGATGTAAGTGGACCATGGAAGGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAATAATCTAGAAGATAAGGTAGCTATTTCTTGTAGCTCTGGCAATATTAAAAGCAAAGAAAATTCTGGTTTAGTCAGAGGCTTGATGGCTGTTGGTTTATCAGCATACAGAGGTGCTTATACATCTGTTAGGGAAGTTTCTAATGAGGTGCGTAAGGTGCTTGAGATCTTAGTTAGGGAAGTCAATACAAAAGTTCAAGCTGGTAAAGATAGATATCAGTATCTGCGTGTTCTATCCCAAGTGGCCTATTTGGAAGATATGGTCAATAACTGGGCCTGTGCATTGTTGAGTCTAGAGCAGGATTCCCCAGAGCTTGTGAAAAAACTTACATCAGCTAGTGTTGAGTCAATAAACAGGCATGAAAATCACCAAGTTGATGATGAGAATTGCCAGTTGGATGTCCCCATCCAAGGTCATGAACCAGAGATAATGGAGAGAAGTCCCAAAGGAATTGCTGCTGAGATGCCTGGATCTCCTGCCTTGAATAACGGAAATGATCATGTAGATAATCTTGATCGTGATGGTAGAGTGCTGAATTCAGAAGGATCCCTGAAGAACCATTCTTTTTCAGATGAGCATTATAACTCTGCTTCTACAAGCCAGACTGTTGATGCAGTTGCAAATATGGAGAATGGCTCACTATCTGCACTATCAGAATCAAGAACAGCTGGAAGTCATGAAATGATAAATGGAGAATGTGGGCCCCCAAAAGGCCCAAATGGATCTACAGCCACTCACACTGTTGCCCTTTGTGAAAATGATGAGTTCTGGTTGTCAAAAGACGTAAATGAATCCACATTTACTCATTCTCTTGCCCTTTCTAATGATGAACACCGCAGTGCCTGTGAACTAGAAGGTGCTGAGATTGCTAACTCCAGGACAGTCTCTATTACGGATCCCAGCTTGTTCTCAGCAGAGACTGGTAATAAATTAAATGATAACTCTGGTATAGATGGGAATGCTGTAGAAATTGACGTCTCTTCAAGTAAGGACTGTGATCCTCCTGAATCTGGGGTCATCTGTTTGTATCAATGTTGCCCTGGATGTCTTGAGAGTCTTTATCATTTGACACACAAAATCATTGTTAATGAGTGGAGGTTGAAAAGAAGCCGTTGGACAGTGGAAGATGTTCATGATGTTGTTGCAACATTATCTGTGGATCTTGTTTCAGCAGTAAGAAAATTTTATTCTGCTGAAGATTTGTGTGACTTGTCTAATAAAACCTCAAGACTGGAAAAGCAGGCAATGTCTCTTGACTGTTTGAACTCAAGAACATGTTGCCCCAGAAATCTAGACCGGGCTGTTGCACCAGCTGAATGTATGTCTCACACCACGAGCCAACATGCAACTGGGAGCAAAGATACAGCATTGAGTGAACTGAAGCTTGATTTAAAATTTGTTTTCAGAGATGGTGTACTGGTTCATAAGGACCCTGACAAGAACGTCTCTCTTCACTGTAAATTTGAGACCTTGTGCCTCTGTTCTCTTAAAGAGTTCATAGTAATGACGAAGCATCCTTTTGACTGA 5589 0.4285 MRLSSASGSSLEQRRIDRSASRLRKKHKRLDAICEKEYNRNHSELNEDDVGAGAMGADTELRRSSRVRRAPVVLDASPPPPKKRRRLGKDVMLRGVRDVESPGSVNQSPGKVESLGTWSSRLRSSVKNVSFKVNGERESPRGKRKLFEDMDENKDDGKVEVLEINKKEELEGGMPKIVKSKRPGRIKATKHAEGHKHNESHGTKDESKSQVELNLNQDEENASISEPKLTGGNVIEIVDGNAPPTIGTSERHITDNLQLELVNGNVELSPVKHVDKPVNQLESVNESENGRDAEEIVGNVTKQVENEGSVDKEFEIDEKTLQDENIVKTDKPKQASSDMTGQPRIKEGRRCGLCGGGTDGKPPKRLVQDNGESENEAYSGSSASEEPNYDIWDGFGDEPGWLGPLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPHGSQYFARIKKLKARKMKLEMRKLSNDALRKDIEAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGPDFDNEKSFQGWESVAGLKDVIRCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTHRWPKPVTGSLLEWIARKTPGFAGADLQALCTQAALNALKRNFPLQEVLSAAAEKNSGCKRLPLPSFAVEERDWLKALSCSPPPCSRREAGNAANDVVCAPLPLHLIPCLLRPLCTLLVSLYLDERLWLPPPISKAATRIKNVIISALLKKKMSIDHWWLHIDDFLQDADIAADVERKLTCSGILSANDGFAGFNDLDDSNDNWEKLEPSIKHHVGTSSGSLSNMSFALTNKSGFRILIAGNPKSGQRHLASCLLYCFVGNVEMQKIDMATISQEGHGDAVQGIAQILLKCASVQSCVVFMPRIDLWAVETRFRVAENSDHCSTNHQIPEMEKSSDRQSLDFEKQNEFNPKKNKSTKMAKGQASTRASHAWMSFIEQVESIGVSTSLMILATSEVPYPELPSKVRDFFKSYQSNSSHSTSLVQTVLRFPLQIDGNFDHDVMINLSTVELLRNVTEQLVQLIHRRSHIHIGVQKGYRIYDSEEDCKDRACQEKDNGSANEDMAKIQLSEPSTKVPSPPHSRLLKGKSTLLLAISTFGYQILRFPHFAELCWFTSKLREGPSADVSGPWKGWPFNSCIIRPNNLEDKVAISCSSGNIKSKENSGLVRGLMAVGLSAYRGAYTSVREVSNEVRKVLEILVREVNTKVQAGKDRYQYLRVLSQVAYLEDMVNNWACALLSLEQDSPELVKKLTSASVESINRHENHQVDDENCQLDVPIQGHEPEIMERSPKGIAAEMPGSPALNNGNDHVDNLDRDGRVLNSEGSLKNHSFSDEHYNSASTSQTVDAVANMENGSLSALSESRTAGSHEMINGECGPPKGPNGSTATHTVALCENDEFWLSKDVNESTFTHSLALSNDEHRSACELEGAEIANSRTVSITDPSLFSAETGNKLNDNSGIDGNAVEIDVSSSKDCDPPESGVICLYQCCPGCLESLYHLTHKIIVNEWRLKRSRWTVEDVHDVVATLSVDLVSAVRKFYSAEDLCDLSNKTSRLEKQAMSLDCLNSRTCCPRNLDRAVAPAECMSHTTSQHATGSKDTALSELKLDLKFVFRDGVLVHKDPDKNVSLHCKFETLCLCSLKEFIVMTKHPFD 1862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1572 1595 - -
Bisa12g0541 1862 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 346 502 - -
Bisa12g0541 1862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 502 IPR013083 -
Bisa12g0541 1862 ProSiteProfiles Extended PHD (ePHD) domain profile. 390 500 IPR034732 -
Bisa12g0541 1862 Pfam ATPase family associated with various cellular activities (AAA) 626 761 IPR003959 GO:0005524|GO:0016887
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1095 1115 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1535 1551 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1101 1115 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 192 211 - -
Bisa12g0541 1862 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 762 854 - -
Bisa12g0541 1862 Pfam AAA+ lid domain 787 819 IPR041569 -
Bisa12g0541 1862 Gene3D - 587 861 IPR027417 -
Bisa12g0541 1862 SMART AAA_5 622 763 IPR003593 GO:0016887
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1505 1551 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 372 386 - -
Bisa12g0541 1862 Gene3D - 762 854 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 45 88 - -
Bisa12g0541 1862 PANTHER AAA DOMAIN-CONTAINING 22 1765 IPR045199 -
Bisa12g0541 1862 ProSitePatterns AAA-protein family signature. 731 749 IPR003960 GO:0005524|GO:0016887
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 330 389 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 177 211 - -
Bisa12g0541 1862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 854 IPR027417 -
Bisa12g0541 1862 FunFam ATPase family, AAA domain-containing 2 585 768 - -
Bisa12g0541 1862 MobiDBLite consensus disorder prediction 1 30 - -
Bisa12g0541 1862 Pfam PHD-like zinc-binding domain 421 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0541 Bisa-ChrBisa12 7991275 8001388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0541 588 823 Calmodulin-binding Proteins AT3G56690 40.756 1.37e-44 175