Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0518 ATGGGAGAAACAGAAACCCATCAGCAAGGAACCACGTCGTCCAGATTGGGGATGAGGGGCGGATTGGGAGAGATCGTGGAGGTGCAAGGAGGCCACATTGTTCGCTCCACAGGACGCAAAGACCGCCACAGCAAGGTCTGCACCGCCAAGGGCCCCAGAGATCGCCGAGTTCGTCTTTCCGCTCACACCGCCATCCAATTCTACGACGTCCAGGACCGACTCGGCTACGATCGACCCAGCAAAGCCGTTGATTGGCTCATCAAGAAGGCCAAAGCCTCCATAGACGAGCTCGCAGAGCTTCCCGCGTGGAACCCCAATACTTCTGCTTTATACACAAATTCTCAGCAGCAGAATCAGCAGGCGCGCGACGAGAACGAGAACAACCCCATTGGGACGGTGGACGCAATTGCTTCCGGTAGCTCAGCTGCCGTCTGCAGCGGCAGGATTTCGGAGTCTTGTGTACGGAATTATCAGCCACAGTTGGGGGAGAATCCGAATGGGAGATCGAGTTTTCTTCCCCTGTCGTTGGACAGTGACATTGCTGATACCATCAAGTCTTTCTTTCCGATGGGTGCGGCAGCGGCAGAGGCGGTGTCTCCATCGATTCAGTTTCAGAACTACCCACCAGATTTGCTTTCGAGAACAAGTAGTAGTAGCCAGAGCCAAGATCTGCGTCTCTCGCTCCAGTCCTTGCAGGACCCGATTCTGCTTCACCAGGCCCAGCACCATCCTCATCACCATCAAGCGCAGGCCCAACACCATCACAATGAGCAAGTCCTTTTCTCTGGAACGAGCCCTCTAGGGTTCGATGGGACTTCTACTGGTTGGTCCGAGAACCACCACACAGAAGAACATGGCCGTTTGCTTCGAATGGTAGCTTGGAATGCTGGTGCCGATACTGGTAGTAACTGTGCCCACGGCGCACCCGGTGGCGGAGGATTTATCTTCAACTCTCCGTCACCGACGACGACGACTCAGCTGCCGGCGCCACCGCCGTTGTTCGGCCAAAGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACAACCCTTCGATTCGTGCTTGGATAGACCCGTCATCAATCGCCACAGCAACTACCATCACCGACCATCCCCATCATCCCTATGTTCCGGCGACATTACATCATTATTCATCGTCCATCTCGGGCATCGGATTCGCTTCCGATGGTTTCTCCAGTTTCCGCATACCAGCACGAATCCAGGGTGAAGAGGAACACGACGGCGTATCCGATAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 1293 0.5522 MGETETHQQGTTSSRLGMRGGLGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWNPNTSALYTNSQQQNQQARDENENNPIGTVDAIASGSSAAVCSGRISESCVRNYQPQLGENPNGRSSFLPLSLDSDIADTIKSFFPMGAAAAEAVSPSIQFQNYPPDLLSRTSSSSQSQDLRLSLQSLQDPILLHQAQHHPHHHQAQAQHHHNEQVLFSGTSPLGFDGTSTGWSENHHTEEHGRLLRMVAWNAGADTGSNCAHGAPGGGGFIFNSPSPTTTTQLPAPPPLFGQSQYLSQRGPLQSSNNPSIRAWIDPSSIATATTITDHPHHPYVPATLHHYSSSISGIGFASDGFSSFRIPARIQGEEEHDGVSDKPSSASSDSRH 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0518 430 MobiDBLite consensus disorder prediction 1 21 - -
Bisa12g0518 430 ProSiteProfiles TCP domain profile. 39 97 IPR017887 -
Bisa12g0518 430 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 348 IPR005333 GO:0003700
Bisa12g0518 430 MobiDBLite consensus disorder prediction 315 352 - -
Bisa12g0518 430 MobiDBLite consensus disorder prediction 108 130 - -
Bisa12g0518 430 MobiDBLite consensus disorder prediction 1 16 - -
Bisa12g0518 430 MobiDBLite consensus disorder prediction 407 430 - -
Bisa12g0518 430 MobiDBLite consensus disorder prediction 316 352 - -
Bisa12g0518 430 Pfam TCP family transcription factor 38 126 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0518 Bisa-ChrBisa12 7802016 7803308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0518 20 430 TCP Transcription Factor Family AT3G15030 53.066 1.18e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa12g0518 TCP 4.4e-32 No_clan