Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0513 ATGATAAACGGCGGACTGTGCAGTCTCCGCAAGTGTGGCTTGCGTCTTCGTTGCTTCTCAGAGAAACCTCTTCTCCGAGTAGCTCGGGTCTCATTTACTTGCCGCCGCCGCGTTTTGGCCACGGCGTCCTCGGTTTCCGAAGCCAAGAAGAAGGAGACCAAAGAGAAGGTTATAGTGATTTCTGGTCCCACTGGGTCTGGTAAAAGCCGGCTTGCGTTGGAGCTCGCGAAGCGCCTCAATGGTGAAATTGTCAGTGCGGACTCCGTGCAGGTATACCAGGGTCTTGATGTTGGATCGGCGAAGCCCTCCCTAAATGATAGAAAGGAGGTACCACATCATCTAGTCGACATATTGCACCCATCTGAAGATTACTCAGTTGGAAAATTTTTTGAGGATGCAAGGCAAGCTACAAGGTCCATTCTAGACAATGGTCATGTGCCTATAGTTGTTGGGGGAACTGGATTGTACTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAAGCCTCTCCAGAGACTACATCTGAAGTGTATTCAGAGTTAGCTGTATTGCAGAGAAATGGAAATTGGGATACAGCTGTGCAGTTGGTTGTAAAAGCAGGTGACCCAAAGGCACAGTTTATAACTCCTAATGATTGGTACCGGTTGCGACGTAGCCTTGAGATTATCAAGTCTAGTGGATCACCTCCATCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAAGAGGGAGATTCTAGTGTTGTGAAGAATTATGACTCTTCTGATGTCAATGCTTTTGGTGATGGAATGAAAGAAACACCCTCAGATCTGGACTACGAGTTCATTTGTTTTTTCCTTTCTAGCCAAAGACTTGACCTCTATAGATCAATTGACTATCGCTGTGAGGAGATGCTATTAGAAAGGGATGGGATATTGTCTGAGGCTCAATGGCTTCTTAATATGGGTCTTCGTCCAAATTCAAATTCTGCGACTAAGGCAATCGGTTACAGGCAGGCCATGGAGTACTTACTAAGATGCAGAGAGCAAAGGGGTCACAGTTCAGCTCGAGAATTCTTCAATTTTTTATCTGAATTTCAAAAAGCATCTAGGAATTTTGCCAAAAGACAATTAACTTGGTTCCGTAATGAACATATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAACTGTTCTAGACTTCATCTACAATTCTTACCATGACAAGAGTGGAACTCTCGTAGTTCCTAAACACCTAAGAATGTCCAGAGACGTTTCTAACGGCCGAGAAGCTTCCGAACTCAAGTCCTACCGGACCAGAAATAGGCATTTCTTGAATAGAGAAGATTGTTCTCAAGTTCTGGACTGGATAAGGAGGACACAGGTCTGA 1374 0.4476 MINGGLCSLRKCGLRLRCFSEKPLLRVARVSFTCRRRVLATASSVSEAKKKETKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSLNDRKEVPHHLVDILHPSEDYSVGKFFEDARQATRSILDNGHVPIVVGGTGLYLRWFIYGKPDVPKASPETTSEVYSELAVLQRNGNWDTAVQLVVKAGDPKAQFITPNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREEGDSSVVKNYDSSDVNAFGDGMKETPSDLDYEFICFFLSSQRLDLYRSIDYRCEEMLLERDGILSEAQWLLNMGLRPNSNSATKAIGYRQAMEYLLRCREQRGHSSAREFFNFLSEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLETVLDFIYNSYHDKSGTLVVPKHLRMSRDVSNGREASELKSYRTRNRHFLNREDCSQVLDWIRRTQV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0513 457 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 54 388 IPR039657 -
Bisa12g0513 457 Hamap tRNA dimethylallyltransferase [miaA]. 57 395 IPR018022 GO:0008033
Bisa12g0513 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 178 IPR027417 -
Bisa12g0513 457 Gene3D - 54 448 IPR027417 -
Bisa12g0513 457 FunFam tRNA dimethylallyltransferase 9 165 236 - -
Bisa12g0513 457 Gene3D - 165 236 - -
Bisa12g0513 457 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 57 234 IPR018022 GO:0008033
Bisa12g0513 457 Pfam IPP transferase 90 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0513 Bisa-ChrBisa12 7693900 7714386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0513 60 338 C2H2 Transcription Factor Family AT2G27760 27.178 7.67e-21 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0513 12 7693900 7714386 Bisa12g0513 12 7693900 7714386 ECH