Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0510 ATGGATCCCACCAAGAAGCGAAAGCTTGAGGAAAACGACGTCGTACCAGCTGATTCCAATATCAGTCTTACTCCTTCCGATGTGCGCAAAATCATTGATTGCTTTAACCCCAACCAACACCTCGATATCCTCCAGGACGCCGTCGTCCGCTATAGTGACGTCCTCGACGCCATGCGATCTATTGCAGATCCTAATGTCTCCCAGCACAAGCTGTTCATCCATGGGCTTGGGTGGGACACCACCACCGATAGCCTCTTGAGTCTCTTCTCTACATACGGTGAGCTTGAAGAAGCGGTCGTAATTCTTGATAAGGGTACTGGCAAGTTTAGGGGATATGGGTTTGTCACCTTCAAGCACGTCGATGGTGCTTTGCTTGCCCTGAAGGAGCCCAGCAAGAGGATTGATGGTCGCGTCACTGTGACGCAGCTTACGGCGGCAAGGAATTGTGGGTCGAACACTAATGCGGTGGATATTGCGTTGCGAAAGATATAG 492 0.5081 MDPTKKRKLEENDVVPADSNISLTPSDVRKIIDCFNPNQHLDILQDAVVRYSDVLDAMRSIADPNVSQHKLFIHGLGWDTTTDSLLSLFSTYGELEEAVVILDKGTGKFRGYGFVTFKHVDGALLALKEPSKRIDGRVTVTQLTAARNCGSNTNAVDIALRKI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0510 163 Gene3D - 60 142 IPR012677 -
Bisa12g0510 163 SMART rrm1_1 70 142 IPR000504 GO:0003723
Bisa12g0510 163 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 138 IPR000504 GO:0003723
Bisa12g0510 163 SUPERFAMILY RNA-binding domain, RBD 60 139 IPR035979 GO:0003676
Bisa12g0510 163 PANTHER GEO13361P1-RELATED 52 147 - -
Bisa12g0510 163 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 148 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0510 Bisa-ChrBisa12 7657490 7657981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0510 17 147 C2H2 Transcription Factor Family AT2G19380 34.351 1.99e-26 102