Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0507 ATGGGAACACCATTCAAGCCAGTTTCATGTCCCAGAAAAACCCCATATAGAATAGAAACCAAGAACTTGTCATACAGGTTATGCAGCCAGTTTGATGAACTCAGAAGTCTTTGTTTTGGTTCAAATCATAGGAGGGGTGGTAAGTTGATATTGAAAGATGTGAATTGTGAAGCAAGACCTGGGGAGCTTACTGCTATTGCTGGTCCTAGTGGAGCTGGGAAAACCACACTGCTTGAGATTCTTGCTGGGAGAGTATCCCCATGTGAGGTTTCAGGGCAAGTGCTTGTCAATCATCGGCCAATGGACTTGAACCGGTTTAGAAGAACATCGGGGTATGTCACACAAGAAGATACTTTGTTCCCTTCACTTACAGTTAGAGAGACACTCATGTATAGTGCACTTCTGAGGCTTCCTGGAGGGAGAGAAGTGGCTGCTGCTAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGAGCAAATTGCAGATTCAAGAATTGGTGGAGGCGCTGGTGGAGCAAGCCATGGGATATCGGGTGGGGAAAGGCGAAGAGTTTCAATTGGAGTTGATTTGGTTCATGACCCTGCAGTTATTCTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCTCTGAACATAGTCTCCTTGCTTAGAGTAATGGCATTTAACCAAGGTAAGACTATTGTTTTAACCATCCACCAGCCCGGGTTTCGAATTTTAGAGCTAGTTGATCGCCTTGTTTTGCTTTCGGATGGACTTGTCATGCATAATGGGTCATTGAGTCTCCTTGAGGCTAGGCTCAAGTTAGCTGGGCATCACATCCCTCCCCATGTCAATGTCCTCGAATTCACCCTTGATGTCATGGGAAGCCTGGTCATACAAACCTCAGAATCTGTCAACAACCAGTTTCTTCTCAGAGACAAAGAGGACCAAGTTTGTAAAACGAGGATGCAGTACTCTATGAATGTCAAAGAAAAGGCACTTCAGTACCCGAATTCTCCAATGGAGGAGGTTCTAATCCTAGGACAAAGGTTTTGCTGCAACATATTCAGAACCAAACAACTCTTCGTCACTAGAGTCATACAAGCCTTGGTAGCTGGATTTGTGCTAGGAACCATATTTTTTAACGTTGGCAACCGAAAAGGTCAAGTAGCCTTACAAACACGAAGCGGGTTTTTTGCTTTCAGCCTTACATTCTTGTTATCTTCAACAGCAGAAGGCCTGCCTATTTTCCTAGAAGAGAGGAGGACTTTGATGAAAGAGACCTCAAGAGGAGCTTACAGAGTTTCTTCCTATGTTTTAGCAAACACCTTTGTGTTTCTTCCTTTCCTTCTGATGGTTGGTCTTCTATATTCTACTCCAGTTTATTGGCTAGTAGGATTAAGGAAGGACATTGATGGGTTCCTATACTTTTCTCTAGTCGTTTGGTTGGTGGTCCTCATGTCAAATTCTCTCGTAGCGTGTTTCAGTGCTCTGGTGCCAAATTTCATCCTGGGAACCTCGGTGATTGCAGGGCTAATGGGTTCTTTCTTTCTGTTTTCAGGGTATTTCATATCAGAGGGAAACATACCCAGATACTGGATTTTTATGCACTATATGAGTCTATTCAAGTACCCATTTGAATGTTTCATGATAAGTGAATATGGAGGAGAACAAGGGAAAACTAGATGCCTGGAAAATAGGAATGAGGAATGCAGTTTATATGGAGTTGAGTTCTTAAGACAGCAAGGTCTGAAAGAGTCACAAAAATGGAGCAATTTGGCTGTAATGTTGGGGTTCATAATTGGTTATAGAGCTCTTTGCTTTTTGATCCTGTGGTGCAGATGTTACAGAACCAGAAAATAG 1848 0.4318 MGTPFKPVSCPRKTPYRIETKNLSYRLCSQFDELRSLCFGSNHRRGGKLILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRVSPCEVSGQVLVNHRPMDLNRFRRTSGYVTQEDTLFPSLTVRETLMYSALLRLPGGREVAAARVAELMKELGLEQIADSRIGGGAGGASHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSLLRVMAFNQGKTIVLTIHQPGFRILELVDRLVLLSDGLVMHNGSLSLLEARLKLAGHHIPPHVNVLEFTLDVMGSLVIQTSESVNNQFLLRDKEDQVCKTRMQYSMNVKEKALQYPNSPMEEVLILGQRFCCNIFRTKQLFVTRVIQALVAGFVLGTIFFNVGNRKGQVALQTRSGFFAFSLTFLLSSTAEGLPIFLEERRTLMKETSRGAYRVSSYVLANTFVFLPFLLMVGLLYSTPVYWLVGLRKDIDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISEGNIPRYWIFMHYMSLFKYPFECFMISEYGGEQGKTRCLENRNEECSLYGVEFLRQQGLKESQKWSNLAVMLGFIIGYRALCFLILWCRCYRTRK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0507 615 Pfam ABC-2 type transporter 339 549 IPR013525 GO:0016020|GO:0140359
Bisa12g0507 615 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 599 - -
Bisa12g0507 615 SMART AAA_5 60 254 IPR003593 GO:0016887
Bisa12g0507 615 FunFam ABC transporter G family member 10 35 283 - -
Bisa12g0507 615 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Bisa12g0507 615 Pfam ABC transporter 51 204 IPR003439 GO:0005524
Bisa12g0507 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 268 IPR027417 -
Bisa12g0507 615 Gene3D - 17 274 IPR027417 -
Bisa12g0507 615 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 277 IPR003439 GO:0005524
Bisa12g0507 615 CDD ABCG_EPDR 45 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0507 Bisa-ChrBisa12 7633325 7635172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0507 12 264 Calmodulin-binding Proteins AT2G36910 27.925 3.38e-12 67.8