Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0503 ATGTTCCGCAGAAAAGAAATAGAGGATCTATGTGATGACAATTTTGAAGGATCTGAAGATGAACGACAGATTTTTACAGAGGTTTGCAGTAAAGACACTGTTCAGCCTAGTCAGAGGTGTGATGTTACTAGATTTATCAACTTTGAATGTGAATCTAGTAAAAACACAATTACATCACTCTGTTCTAGTAATGAAAACTCAGTTATAACGAGCCCCTCTTCTTCAAAGGTTATACATCTTGAGGAGGATTGTGATGTAATTCAGCATTCCGAAGAGACTGCTCAAGGTTGTATGACAGAGAGGTTCAATTATGAAAGCCAAAATGACGAGGATGTGAATGTCAAACGCATGAAATTTTCCCTGCACGAACTTCCCTGCAGTAGATCCAATTTAGAAAAGGTTTTAAGTTCAGAAGCATTTTCAAAAGAATTTGTTGCTGACATGTCTTGTTCTGCTTTAAACTGTGATAGTAAACCAATTTCATTTTGTTTAGTTGAATCATCAAAGCTTGGTGTGATATCCAGTTGCTATCCGTTGAAGCATAACATGACACTATATAAAAATTATGCTAAGGATGATGTAGATGTTTCAAATTGTACAAAAACCAGTGCAGATGGAAATGTTGCAAAAGAAGTGGCTGCATGTAAAGTGGTTGCTTCTCCTGTCTCCCAAGAGAGCTTTGTGAACAGGCTTGTAATAACAAGTCCAACAATCACTGCTGTGGAGAAGTCTGGATCTCATTCTTATTTTGAGGAAACACCTAAAGGATTTTTATCTTCTAATATGGATGTGTCAAATTTATCATTGAAGCCAGGCATTAAAAGGGATCCCCGTGATTTACTGCATCAGCGGAGTGTGCAGCTGCTTATGATGGCAGGATGGTCTATTGAGAAGCGTAAACGACCTTGCAGACGTCACACAGAGTCAGTATATAGGACACCAGAGGGAAGGCCAGTTCGTGAGTTTATAAAAGCTTGGAGTTTATGTGGTCAGTTATTGTCTGTTGACAAATACAATTTAATGCAGGAAGATTGTAAGGAATGGACTGACATCAGTCAATTTTGGTCTGATCTATCCGGTGCACTGATAAATGTTGAAAAAGAAATGAACCATTCAGAGCCTGCTGCTATGTTGGCTTATCAGTGGTGGCTTTTGGATCCTTTTGTAGTTGTTATTTTTGTTAAAAGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTTAAAGCAACTCGAAGTATAGTTTCTAGTAAGAATAACACTGCATGTACTACTATTGGTTCAGCTTGGAAGAATACTTCTTCAGCTCAATTTGATCAGGAACATAGCTTTGCTTTTCTTTTTGATTCTTCTAAAGCTACTGGGAGCACACTATTGCCTTCTCTGCTCAACTACCACGCCTGTAATCAGAAAACTGGTCACGGAAATATCTTAGGATATGGACAGAAAGTTAATGGGGTAGTGAAACTTCCAAGATGTGAATCTGTTAGTATCGGTAACCAGGAAAATATGTACAGTGAACACATTGCTGGTGGCGTAGGAAATCAATGTTGGAAAATGCCTGTGAACGAAATGAGCAGTCTGGATGCAGTCTCTTTTCCTGATCATGGGTTGGGTTGTACTGGTACACAGTCAAGTACTTGCACTTTTGATGTTCTTACAACTTCTAGAAATTCTAATGAGGTATTTGGAGGGCTTAAATTTAACACTTGTCATGAAAGTAAAGCTAGAAATTCCATAAGCTCTGGTAAAGAGTGTTTGGAAAATTTTTTGGAAACAAATAAGAGAGTTCATGGGGAAGTGCCAATGGACAAGTCAGAGGAAAAGGATGCACGAATTGAAGGCCAACTTGGAAGTTGTCTGCAGGCATCCCTGGATAGCCAACCACATTTATTAAGTCATGGCCTGGTTCATTGTCGTGACTCAGAGCCTGTTCAGCTGTCTGGATATGGGGAGGAAGAGGGTGGGAAAAGCTCAATAGCTTCTGTGCTTGAGACAGAAAACACATGTTCTACCTCTGATGTTACACTGAAAAAGAAGATACGGAGGAAGTGTAAAAAGGTATCTGAAATCAAACTGAGTATGTTATATGAAAGTGACATGATGGGTTCTACATTTACTGATGAGGTCCAATTACTGAATGCAGAAAGAATTGACACTCACTTGGAATTTGAAGAGGTCAAGGAGTATCTAGTTGACAATGCAGAAAATAGTGGAACTCATAGGAAATTATCTTCTAGTTCATTTCAGCAACATATTAGGAAAACAAATGCAAAGTTTAGAAAGATTTGTCGCAAGTATGACTCTGCAACTGAAAAACAAAAGCCTAGTAGATGCCAGATTGAAGATGATGATCTGTTGGTTTCGGCTATTTTGAAGAAAAAAGGTTTCATCTCAAAAGCAACTCGTGGTGGCTCTAAATCTAAATCCTGGAAATCAAGAGCCCGGAGAAAGCCGAAAGGCCAAAAGGGTCATTGCAAGTTGCTACCAAGGAACCTCGGTAATGGAGGGAAGCACATCAATGATGGCAAATATTATCTAGGTGTCAGAACAGTGCTGTCCTGGTTGATTGAGAATGGGATCATATCTTTAAATGATGTGATTCAATACCGAAACCCTAAAGATAATGCTGTCCTAAAGGATGGCAGGATTAGCAGGGATGGTATTATATGTATGTGCTGTGGTAAGTTGCTTACATTGTCTGAGTTCAAGCTTCATGCTGGTTTTAGCCTCAATCGCCCCTGCTTGAACCTTTTCATGGAGTCTGGTGAGCCCTTTACATTGTGCCTGCTTCAAGCTTGGTCTGCTGAATACAAGGCCAGGAAAAGCGGGAATCAATCTGTGAAAGCTGATGATGATGATAGAAATGATGACTCATGTGGGTTGTGTGGTGATGGGGGTGAGCTGATATGCTGTGATAACTGTCCATCGGCTTTTCATCTTGCTTGTTTGTCCACTCAGGAGATCCCTGAAGGCAACTGGTACTGCACAAACTGCTGTTGTCAGATATGTGAGAATTTTGTCAATGATAAAAAGGCTTCAGGTGCTCATGATGCTTTGCAATGTTTGCAGTGTGAGCATAAATATCACGAGAAATGTCTGAATGGAAGAGATAAAGCAGAAGGGGAAGTTTCTGACTCTTGGTTTTGTGGTGAACATTGTCAGGAGGTATACTGTGGTCTTCAATCACAAGTTGGTTTTGTAAATCATGTTGCTGATGGCTTCTCATGGATGCTTCTTAGATGCATCCACGATGACCAAAAGGTTCATTCTGCCCAGTGGCTTGCCCTGAAGGCAGTATGCAATACAAAAATAGCTGTTGCCCTTACCATCATGGAGGAGTGTTTTTTGTCAATGGTGGATCCAAGAACAGGCATAGACATGATACCCCATGTTCTATATAATTGGGGGTCTGATTTTGGTCGCCTGAATTTTAAAGGGTTTTACACTGTGGTATTGGAGAAACAGGATGTGTTGATTTCTGTAGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCTCTGATTGCAACTTGCAGTCAGTATCGTCGACAGGGAATGTGCCGTCTCCTTGTGAGTGCAATTGAAGAGATGTTAATATCGATCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCTGATGTAGCGGAGACTTGGACCAGGGGCTTTGGATTCAAGCCTATAGGTGATATTGAAAAGCAGAGATTGAACAAAATCAACTTGATGGTTTTTCCTGGGACTGTATTACTTGAAAAACCCTTGTTCAAGGAGGAGAATATAGAAGCTGAAACAGGACGATGTGATCCATCAACCTTAGTAACAGATCACTCGACCAACTTAGGTGTCTGTTTTAAAGGAATGGGCATGGCTGAATCATTGCAGCAAGATATTGGAAACAGTTCCGCTGATAAAATTGGTGCTAAGTCAGAAACTGGGAATGTTTGTTGTGAAAATTACACACAATACAGAGCTGAGTCACTGCAGCAAGATGTTGGAAACACTTCTGATAAAATGAGCCCCAAATCAGAAATTGAACATATTTGCATCAAGCACCACCCAGATTACAGAGCTGAATCATCGCAGCAAGATGTCAAAAGCACTTCTACTGATGAAATGAGTGCTAAGTCAGAAACTGAACACATTTGCGGTATGAAATGCCCAGATTTCAGAGCTGGATTTGAAACCAGCATAAATGATTATACACTAGCCGTTGACACGTCACTTGGAGCCAAAGAGACAACAGAGACAAGTAGTAATCCAATAGGAGAGAAGATCATGGGCTTTGTAGAGCAGTCTGGTGCCCCAGCGAAATCTGTCCAGGTAAACAATATGAAGGATTTGAGAATTAGCTGCACAAAGGATAAGAGTCTCTGGAGCAATGGAATAGGAAATGTTGTGCTAACAAAGATGGTACTGAACCATGAGTAA 4431 0.4049 MFRRKEIEDLCDDNFEGSEDERQIFTEVCSKDTVQPSQRCDVTRFINFECESSKNTITSLCSSNENSVITSPSSSKVIHLEEDCDVIQHSEETAQGCMTERFNYESQNDEDVNVKRMKFSLHELPCSRSNLEKVLSSEAFSKEFVADMSCSALNCDSKPISFCLVESSKLGVISSCYPLKHNMTLYKNYAKDDVDVSNCTKTSADGNVAKEVAACKVVASPVSQESFVNRLVITSPTITAVEKSGSHSYFEETPKGFLSSNMDVSNLSLKPGIKRDPRDLLHQRSVQLLMMAGWSIEKRKRPCRRHTESVYRTPEGRPVREFIKAWSLCGQLLSVDKYNLMQEDCKEWTDISQFWSDLSGALINVEKEMNHSEPAAMLAYQWWLLDPFVVVIFVKRKIGALKKGELVKATRSIVSSKNNTACTTIGSAWKNTSSAQFDQEHSFAFLFDSSKATGSTLLPSLLNYHACNQKTGHGNILGYGQKVNGVVKLPRCESVSIGNQENMYSEHIAGGVGNQCWKMPVNEMSSLDAVSFPDHGLGCTGTQSSTCTFDVLTTSRNSNEVFGGLKFNTCHESKARNSISSGKECLENFLETNKRVHGEVPMDKSEEKDARIEGQLGSCLQASLDSQPHLLSHGLVHCRDSEPVQLSGYGEEEGGKSSIASVLETENTCSTSDVTLKKKIRRKCKKVSEIKLSMLYESDMMGSTFTDEVQLLNAERIDTHLEFEEVKEYLVDNAENSGTHRKLSSSSFQQHIRKTNAKFRKICRKYDSATEKQKPSRCQIEDDDLLVSAILKKKGFISKATRGGSKSKSWKSRARRKPKGQKGHCKLLPRNLGNGGKHINDGKYYLGVRTVLSWLIENGIISLNDVIQYRNPKDNAVLKDGRISRDGIICMCCGKLLTLSEFKLHAGFSLNRPCLNLFMESGEPFTLCLLQAWSAEYKARKSGNQSVKADDDDRNDDSCGLCGDGGELICCDNCPSAFHLACLSTQEIPEGNWYCTNCCCQICENFVNDKKASGAHDALQCLQCEHKYHEKCLNGRDKAEGEVSDSWFCGEHCQEVYCGLQSQVGFVNHVADGFSWMLLRCIHDDQKVHSAQWLALKAVCNTKIAVALTIMEECFLSMVDPRTGIDMIPHVLYNWGSDFGRLNFKGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSQYRRQGMCRLLVSAIEEMLISIKVAKLVIAAIPDVAETWTRGFGFKPIGDIEKQRLNKINLMVFPGTVLLEKPLFKEENIEAETGRCDPSTLVTDHSTNLGVCFKGMGMAESLQQDIGNSSADKIGAKSETGNVCCENYTQYRAESLQQDVGNTSDKMSPKSEIEHICIKHHPDYRAESSQQDVKSTSTDEMSAKSETEHICGMKCPDFRAGFETSINDYTLAVDTSLGAKETTETSSNPIGEKIMGFVEQSGAPAKSVQVNNMKDLRISCTKDKSLWSNGIGNVVLTKMVLNHE 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0503 1476 CDD PHD1_AIRE 959 998 - -
Bisa12g0503 1476 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 943 1014 IPR013083 -
Bisa12g0503 1476 ProSiteProfiles Zinc finger PHD-type profile. 956 1001 IPR019787 -
Bisa12g0503 1476 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1094 1256 IPR000182 GO:0016747
Bisa12g0503 1476 SUPERFAMILY FYVE/PHD zinc finger 946 999 IPR011011 -
Bisa12g0503 1476 Pfam Tify domain binding domain 881 931 IPR032308 -
Bisa12g0503 1476 Pfam PHD-finger 959 1000 IPR019787 -
Bisa12g0503 1476 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1105 1233 IPR016181 -
Bisa12g0503 1476 MobiDBLite consensus disorder prediction 799 826 - -
Bisa12g0503 1476 PANTHER PHD FINGER FAMILY PROTEIN 1 1383 - -
Bisa12g0503 1476 MobiDBLite consensus disorder prediction 806 824 - -
Bisa12g0503 1476 Gene3D - 1137 1243 - -
Bisa12g0503 1476 SMART PHD_3 1000 1053 IPR001965 -
Bisa12g0503 1476 SMART PHD_3 958 999 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0503 Bisa-ChrBisa12 7592159 7599792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0503 160 412 PHD Transcription Factor Family AT3G14980 37.647 1.49e-38 155