Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0478 ATGAAGAGTGAGAAATCAGATGGGAAAAAGGCAACAATAATGGAAGAGCTTGTGAGAGGGCGTGACTTCGCCAATCACTTGCTTCATCTTCTTCGTCATGAAGAGTCCTTCTTCATTGTATCTCCAGTTGCTGAAGATCTTGTGGATAAGATTCTAAGAACATTCACAAACTCCCTTTTGCTCTTCAATGATACCAATCATCGTGTTGACCAATATTCTCAACATGTCTCTATCACCACAGATTGTTCTTCTGCTTCCAATATTCGCCACAGATCCAAGGATCCTGATCAGGGTTTGGATCGAAGTTGCCATAGCTTTGCCAAAAGAAACCGACGAGGATGTTACAAGAGAAGGAACTACTATAGGTGCAGTCACAAGTATGATCAGGGTTGCCCAGCAATGAAACAGGTTCAGAGAATAAGAGAGAAGCCTGCCTTATACCGAACCACCTATTATGGCCTTCACACTTGCAACAACATCAACCCCTTTACCTATACGGATCCAACTTCTCCTTCTGATTCTTCCTCTTTATTACTTAGCTTTAATAACACTAATAGTAATACCATCCCAACCCAACACCACCACCACCTTTTTCACTCATCATCATCATCATCATCATCCTCAACTCCAAAGAAGGAGCATGATCTTAAAGAGATCGATGGTCTCCATATTGACCATCATATGCATGTCGAACAAAACCAATCATCCTTATCTCATGAATATGCTCCCCAACTCTCCCAGCATGAACATGTCAGCGATGTCACTGTGTTATCGTCAACTTTGGATTTATGTTCTTCCAAGGTTGAATCTTTTGAGGCGGACGACGATATGCTTTTAAGGTGTTTTTATTTCGATGAGTTTGCGGGTTTTGGTCTATGA 879 0.4152 MKSEKSDGKKATIMEELVRGRDFANHLLHLLRHEESFFIVSPVAEDLVDKILRTFTNSLLLFNDTNHRVDQYSQHVSITTDCSSASNIRHRSKDPDQGLDRSCHSFAKRNRRGCYKRRNYYRCSHKYDQGCPAMKQVQRIREKPALYRTTYYGLHTCNNINPFTYTDPTSPSDSSSLLLSFNNTNSNTIPTQHHHHLFHSSSSSSSSSTPKKEHDLKEIDGLHIDHHMHVEQNQSSLSHEYAPQLSQHEHVSDVTVLSSTLDLCSSKVESFEADDDMLLRCFYFDEFAGFGL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0478 292 Gene3D WRKY domain 72 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g0478 292 MobiDBLite consensus disorder prediction 190 209 - -
Bisa12g0478 292 Pfam WRKY DNA -binding domain 112 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g0478 292 SMART WRKY_cls 112 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g0478 292 ProSiteProfiles WRKY domain profile. 106 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g0478 292 MobiDBLite consensus disorder prediction 190 214 - -
Bisa12g0478 292 SUPERFAMILY WRKY DNA-binding domain 109 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g0478 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 117 195 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0478 Bisa-ChrBisa12 7250810 7252605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0478 8 158 WRKY Transcription Factor Family AT3G56400 30.159 1.15e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa12g0478 WRKY 6.2e-11 CL0274