Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0476 ATGAAGAGTGAGAAATCAGATGGGAAAAAGGAAATAATAATGGAAGAGCTTGTGAGAGGGCGTGACTTCACCAATCACTTGCTTCATCTTCTTCGTCATGAAGAGTCCTTCTTCATTGTATCTCCCTTTGCTGAAGATCTTGTGAATAAGATTCTTACAACATTCATAAACTCCCTTTTGCTCTTCAATGATACCAATCATCGTGTTGACCAATATTCCCAACATGTCTCTATCACCACAGATTGTTCTTCTGCTTCCAATATTTGCCACAGATCCAAGAACCGTGATCAGGGTTTAGATCGAAATTGCTATAGCTTTGCCAAAAGAAACCGAAGAGGATGTTACAAGAGAAGAGCAAATATACAGACACGGATTAAGGACTCTCCAGTTCTGGTCGACGATGGGCATGCTTGGAGAAAATATGGACAAAAAATGACAATCAATGCCAAATTCCTAAGTCACAAGAATGATCAGGGTTGCCCAGCAATGAAACAGGTTCAGAGAATAAGAGAGAAGCCTGCCTTATACCGAACCACCTATTATGGCCTTCACACTTGCAACAACATCAACCCCTTCAACTATATGGATCCAACTTCTTCTTCTGATTCTTCCTCTTTATTACTTAGCTTTAATAACACTAATAGTAATACCCTCCCAACCCAACACCACCACCACCTCTTTCACTCATCATCATCCTCAACTCCAAAGAAGGAGCATGATCTTAAAGAGATCGATGGTCTCCATATTGACCATCATATTCATGTGCAACAAAACCAGTCATCCTTATGTCATGAATATAATCCCAAACTGTCCCAGCATGAACATGTCAGCGATGTCACTGTGTTATCGTCAACTTTGGATTTATGTTCTTCCAACAAGGTTGAATCTTTTGAGGCGGACGACGATATGATTTCAAGGTGTTTTTATTTCGATGAGTTTGTTGGTTTTGGTCTATGA 957 0.4002 MKSEKSDGKKEIIMEELVRGRDFTNHLLHLLRHEESFFIVSPFAEDLVNKILTTFINSLLLFNDTNHRVDQYSQHVSITTDCSSASNICHRSKNRDQGLDRNCYSFAKRNRRGCYKRRANIQTRIKDSPVLVDDGHAWRKYGQKMTINAKFLSHKNDQGCPAMKQVQRIREKPALYRTTYYGLHTCNNINPFNYMDPTSSSDSSSLLLSFNNTNSNTLPTQHHHHLFHSSSSSTPKKEHDLKEIDGLHIDHHIHVQQNQSSLCHEYNPKLSQHEHVSDVTVLSSTLDLCSSNKVESFEADDDMISRCFYFDEFVGFGL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0476 318 Gene3D WRKY domain 115 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g0476 318 SMART WRKY_cls 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g0476 318 SUPERFAMILY WRKY DNA-binding domain 129 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g0476 318 ProSiteProfiles WRKY domain profile. 127 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g0476 318 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 214 IPR044810 GO:0003700
Bisa12g0476 318 Pfam WRKY DNA -binding domain 133 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0476 Bisa-ChrBisa12 7212654 7214478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0476 8 187 WRKY Transcription Factor Family AT3G56400 37.097 1.26e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa12g0476 WRKY 3.4e-13 CL0274