Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0474 ATGAGATGCTTTTTGATACTATGCTTCCCTACCTTCTTGTGTGTTGTTTCTGCTCTGAGTCCTGATGGGGTCTCTCTGCTTTCCCTCTCGAGGCATTGGACGTTTGTGCCCCCTCCCATAAACTCCACCTGGAATGCCTCTGATTCTACTCCATGCTCCTGGGCAGGAATCCAATGCGACAATGCCCACAACGTGATCTCCCTCAACCTTACTTCTTTTTCCATTTCAGGTCAGTTAGGCCCTGAAATTGCACACTTGACTCACTTGCAAACCCTTGTTTTGTACGCTAACACTCTCTCAGGAAGAGTACCCTCTGAGATAAGCGAGTGTACCATGCTTGCGTACTTAGACCTTTCTCAAAACAACTTTAGCGGCCAGATACCAAATGGCTTGAGCAACTGTACCATGCTTGAGCACTTAGATCTTTCTGAAAACAGCTTCAGTGGACAAATTCCAAACAGCTTGAAAAACTTGCAAAAAATGCAGTTTTTGAACCTTTATTCCAATCTACTGAGTGGTGAAATTCCTACATACTTGTTTGAGTTACCTCAGTTACAACTTGTGTCTATGGAATACAACAACCTAAGTGGTCCCATCCTTATGAATATTGGCAACGCTACCAAACTTTTGCGGTTGTATTTGTCTAGTAATCAATTGTCTGGGAAAATACCCCCATCCATTGGAAACTGCAGTAAATTAGAGCAAGTGTTTCTGGGTGAGAACCAATTACAAGGGATTTTGCCTCAAACTCTTGACAAACTCCAAAGTCTTGTTTATTTTGATGTCAGCCACAATAATCTTGAAGGTGCAATACCACTAGGTTCTGGCAGTTGTAAAAATTTATATTATCTCGATTTGTCATACAATGTATTCAGTGGAGGTATTCATTCAGGATTAGGGAATTGCAGTGGTTTGACAAAATTTTTTGCTGTCAAAAGCAACTTAGTAGGCAGCATCCCATCTTCGTTAGGCCTATTAAGTAAACTTTCCATTCTTCGCCTTCCTGAGAACCATTTGTCTGGACAAATACCTCCAGAAATTGGTAGATGCAAGTCTTTGGAAGAGTTGGATTTACATATCAATCAACTTGAGGGAGAAATTCCTGGTGAATTGGGATTGCTACAGTCTTTGAAAAAGTTGAATTTACATACCAATCAGCTTGAGGGAGAAATTCCTAGTGAATTGGGATTGCTAAGTCAATTGCAGGATCTCCGATTGTATTACAACAAGTTGATGGGTGAAATCCCTCTTGGCATATGGAAAATTCCAAGTCTTGTATATATCCATTTGTACAATAATAGCTTTTATGGGGAGCTGCCTTTAGAAATCACTGAGCTTAAGCAGCTACAAAATATCTCATTGTTTAACAACCAATTCTCGGGGGTAATACCTCGAAGCTTGGGAATTAATAGTAGTTTGGTGTGGTTGGACTTGACAAATAACAAGTTCACTGGTCACATCCCTCCAAATCTTTGTTTTGGAAAGAAATTAGAGATACTAGTTATGGGTTTTAATCAACTGCAAGGTAGCATACCTTCTGACATAGGAAGTTGTACAAGTCTCACAAGGTTGATTCTCAAAGCAAATAATTTGACAGGAGCTCTTCCTAACTTTGAGAGTAATATGAATTTTGAATACATGGACATCAACAACAATAGCATCAATGGAGCAATTCCATCAACTTTAGGGAACTGCAAAAACCTCACTGATATTAATCTGTCCATGAACAAACTTGTCGGGCTTATACCCTCAGTGTTAGGAAACCTTGTGAACCTTCGCATGTTGAACCTTTCCGACAACAGCTTGGAAGGCCCCTTGCCAACTCTCTTGTCAAATTGTCACCAAATGGAATACTTTGATGTAGGATTCAATTTCCTAAATGGTTCATTTCCCTCAAGTTTCAGCAACTGGACAGGATTATCCACTTTGGTGTTGAGAGAGAATCATTTTACTGGGGGTATCCCAGCATTCTTATCAGAATTCAAGAAGCTCTCAGAGCTACAACTTGGGATGAATTCTTTTGGAGGTGAAATTCCTAGATCGATTGGAACACTGCAGAATCTGCTGTATGGGTTGAATTTGAGTGCTAATGTGTTGACAGGTGAGGTTCCATCAGAGATTGGAAAACTAAAAATGCTCCTAACACTGGACTTATCTCTCAACAATCTATCAGGAAGCATAGAAGTTCTTGAACAACTCTCTTCATTGGTTGAAGTCAATATTTCATTCAATTCCTTTGCTGGTCCCATACCAATTACTCTCATGAAGCTATTGAATTCTTATCCATCATCATTCTTGGGCAATCCTGGCTTATGTCTTAGTTGTTCGTCCTCAAATAGCTTAAATTGCTCCAAAATTGTTAGCTTGAAGCCTTGTGGCTCAACTCATGATCAGAAAGGACCTAGCAGAATTAAAATCATAATGATTGCACTTGGATCTTCATTTTCTATTATTGTTCTGTTGCTAGGACTAGTTGGTATTCTTCTCTATAGTAGAAGATCTAAGCAAGATTTCAAAATCTCTCCTAAACATGGTTCATCTTCCTTTCTTAAGAAAGTGATGGAGGTCACAGAGAACCTAAATGATCGCTTTATTATTGGGAGAGGAGCTCATGGAGTTGTTTATAAAGTTTCACTGAGTCCTGAAAATGTTTTTGCTATAAAGAAACTTCCATTTTCCAACAATGAAGGGAAGAGCCTGAGTATGATTAGAGAACTTAAAACCATCGGGAAGATCAGGCATCGAAATCTGGTCAAAGTTGAGAACTTCTGGTTGAGAAAGGACTATGGTCACTCTCCTACTCTCGATGTTCATTGCTAG 2820 0.395 MRCFLILCFPTFLCVVSALSPDGVSLLSLSRHWTFVPPPINSTWNASDSTPCSWAGIQCDNAHNVISLNLTSFSISGQLGPEIAHLTHLQTLVLYANTLSGRVPSEISECTMLAYLDLSQNNFSGQIPNGLSNCTMLEHLDLSENSFSGQIPNSLKNLQKMQFLNLYSNLLSGEIPTYLFELPQLQLVSMEYNNLSGPILMNIGNATKLLRLYLSSNQLSGKIPPSIGNCSKLEQVFLGENQLQGILPQTLDKLQSLVYFDVSHNNLEGAIPLGSGSCKNLYYLDLSYNVFSGGIHSGLGNCSGLTKFFAVKSNLVGSIPSSLGLLSKLSILRLPENHLSGQIPPEIGRCKSLEELDLHINQLEGEIPGELGLLQSLKKLNLHTNQLEGEIPSELGLLSQLQDLRLYYNKLMGEIPLGIWKIPSLVYIHLYNNSFYGELPLEITELKQLQNISLFNNQFSGVIPRSLGINSSLVWLDLTNNKFTGHIPPNLCFGKKLEILVMGFNQLQGSIPSDIGSCTSLTRLILKANNLTGALPNFESNMNFEYMDINNNSINGAIPSTLGNCKNLTDINLSMNKLVGLIPSVLGNLVNLRMLNLSDNSLEGPLPTLLSNCHQMEYFDVGFNFLNGSFPSSFSNWTGLSTLVLRENHFTGGIPAFLSEFKKLSELQLGMNSFGGEIPRSIGTLQNLLYGLNLSANVLTGEVPSEIGKLKMLLTLDLSLNNLSGSIEVLEQLSSLVEVNISFNSFAGPIPITLMKLLNSYPSSFLGNPGLCLSCSSSNSLNCSKIVSLKPCGSTHDQKGPSRIKIIMIALGSSFSIIVLLLGLVGILLYSRRSKQDFKISPKHGSSSFLKKVMEVTENLNDRFIIGRGAHGVVYKVSLSPENVFAIKKLPFSNNEGKSLSMIRELKTIGKIRHRNLVKVENFWLRKDYGHSPTLDVHC 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0474 939 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 280 367 - -
Bisa12g0474 939 ProSiteProfiles Leucine-rich repeat profile. 352 374 IPR001611 GO:0005515
Bisa12g0474 939 Gene3D Ribonuclease Inhibitor 176 307 IPR032675 -
Bisa12g0474 939 Gene3D Ribonuclease Inhibitor 308 542 IPR032675 -
Bisa12g0474 939 SMART LRR_typ_2 158 182 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 254 278 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 86 110 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 207 230 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 471 494 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 589 612 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 374 398 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 231 253 IPR003591 -
Bisa12g0474 939 SMART LRR_typ_2 326 350 IPR003591 -
Bisa12g0474 939 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 386 922 - -
Bisa12g0474 939 Pfam Leucine rich repeat 546 602 IPR001611 GO:0005515
Bisa12g0474 939 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Bisa12g0474 939 SUPERFAMILY L domain-like 301 552 - -
Bisa12g0474 939 Gene3D Ribonuclease Inhibitor 22 175 IPR032675 -
Bisa12g0474 939 SUPERFAMILY L domain-like 20 308 - -
Bisa12g0474 939 Gene3D Phosphorylase Kinase; domain 1 830 929 - -
Bisa12g0474 939 FunFam Leucine-rich receptor-like protein kinase family protein 368 465 - -
Bisa12g0474 939 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 495 781 - -
Bisa12g0474 939 ProSitePatterns Protein kinases ATP-binding region signature. 866 889 IPR017441 GO:0005524
Bisa12g0474 939 ProSiteProfiles Leucine-rich repeat profile. 712 734 IPR001611 GO:0005515
Bisa12g0474 939 SUPERFAMILY L domain-like 488 787 - -
Bisa12g0474 939 SUPERFAMILY Protein kinase-like (PK-like) 842 928 IPR011009 -
Bisa12g0474 939 Gene3D Ribonuclease Inhibitor 543 786 IPR032675 -
Bisa12g0474 939 FunFam Leucine-rich repeat receptor protein kinase EMS1 179 274 - -
Bisa12g0474 939 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 178 - -
Bisa12g0474 939 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0474 Bisa-ChrBisa12 7080408 7083536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0474 11 930 Receptor kinase-like Gene Family AT1G73080 49.189 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa12g0474 LRR_8 1.4e-07 CL0022