Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0472 ATGAAATACTTTCTGTTGATGCTATGCTTCTCTACCTTCTTATGTGCTGTTTCCGCTTTGAGCCCTGATGGGGTCTCTCTGCTTTCCCTCTCGAGGCATTGGACGTCTGTGCCTCCTTCCATAGACTCCTCCTGGAATGCCTCTGATTCTACTCCATGCTCCTGGGTAGGAATCCAATGCAACAGTGCCGACAATGTTATCACCCTTAACCTCACTTCGTTTTCCATTTCAGGTCAGTTAGGCTCTGAAATTGCACACTTGACTCACTTGAAAACCCTTGTTTTCTACTCTAACACTCTCTCGGGAAGAATACCCTCTGAGATAAGCAATTGTACCATGCTTGCGTACTTAGACCTTTCTCAAAACAACTTCAGTGGGGAAATACCAAATGCCTTGAGCAACTGTAGCATGCTTGAGCACTTAGATCTCTCTGAAAACAGCCTCAGTGGACAGATTCCAAACAGCTTGAAAAACTTGCAAAACTTGCAGTATTTCAATCTTTATTCCAATCTACTGAGTGGTGAAATTCCTGAATATTTGTTTGAGTTTCCTGAGTTAGAACTTGTGTTTCTGGAAAACAACAGCTTGAGTGGTCCCATCCCTATGAATGTTGGCAACGCCACCAAACTTTTGGGGTTGTATTTGTACAGTAATCAGTTGTCTGGGAGAATACCCCCATCCATTGGAAACTGCAGTAAGTTAGAGAAACTGTTTCTGGGTGACAACCAATTACGGGGAACTTTGCCTCAAAGTCTTAATAATCTCCAAAATCTTGTTTCTCTCAACGTCAAGCAAAATAATCTTCAAGGTACAATACCTCTAGGTTCTGGCAATTGTAAAAATTTATCTTTTCTGGATCTGTCATACAATGTATTTAGTGGAGGAATTCCTTCAGGATTAGGGAATTGTAGTGGTCTGACAGAATTTGATGCTATGAATAGCAACTTAGGAGGTAGCATCCCATCTTCGTTAGGCCAACTTAGTAGTTTGGTGACGTTGGAATTGGGAAATAACAAGTTAACTGGTCACATCCCTCCAAACCTTTGTGTTGGAAAGAAATTAAAGTTTCTAGTTATGGGCTTTAATCAACTAGAAGGTAGCATACCTCTTGACTTAGGAGGTTGTACAAGTCTCACAAGGTTGATTCTCAAAGCAAATAACTTAACAGGAGCTCTTCCTAACTTCGAAAGTAATATGAATCTTGAATACATGGACATCAGCAATAATAGCATCAGTGGAGCAATTCCATCATCCTTAGGGAACTGCAAAAACCTCACGAAAATTAATTTGTCCGTCAACAAACTTGTGGGGCTTATACCTTCAGAGTTAGGAAACCTTGTTAATCTTCGCAATTTGATTCTTTCAAACAACAACTTGGAAGGCCCTTTGCCGCCCCTCTTGTCAAATTGTCACCAAATGGAAGACTTTGATGTAGGATTCAATTTCCTAAATGGTTCATTTCCCTCAAGTTTGAGCAACTGGACAGGGTTATCCACTTTGGTGTTGAGAGAGAATCATTTCAGTGGGGGTATCCCAACATTCTTATCAGAATTCAAGAAGCTAATTGAGCTACAACTTGGGGGTAATGTGCTTGGAGGAGAAATTCCTGGATCAATTGGAACTTTGCAAAATCTGCTCTATGGATTGAATTTTAGTGCTAATGGGTTGACAGGTGAGGTTCCATCAGAGATTGGGAAACTAACAATGCTTCTGAGATTGGATTTGTCACTTAACAACTTGTCAGGAAGCATAAAAATTCTTGAACAACTCCCTTCTCTGGTTGATGTCAACATCTCATTCAATTCTTTTGTTGGTGCTGTACCAGATACATTGATGAAGCTGCTCAGTTCTTCTCCATCATCATTTTTGGGCAATCCTGGTTTATGTGTCAGTTGTTCAATCTCAGATAGCTTAAATTGCCCAAAGAATGTCAGCTTGAATCCTTGTGGCTACTTATCAGGTCACCACAAAGGACTGAGTAAAATTAAAATCATAATAATATCACTTGGATCTTCATTTTTTGTTATTCTTCTTTTTCTAGGGATAATATTTATGCTTCTCTTACGGAGAGGATTTGAGCAAGATGTCAAAATCTTACCTGAACATGGTTCAAATTCCTTTCTCAATAAAGTGATGCAGGTTACAGAGAACCTAAATGATCGATATATTATTGGTAGAGGAGCTCATGGAGTTGTTTATATAGTTTCACTGGATCCAATAAACGTTTTTGCTGTGAAGAAATTTCCATTTGCCAACAAGGAAGGGCAAAGCAAAAGCATGAGTAGAGAACTCGAATCTTTATGGAAGATCAAGCACCGAAATCTGGTCAAACTGAAAAGCTTCTGGCTGAGAAAGGACTATGGTCTGATCTTATACAACTACATGCAAAATGGGAGCCTTCATGATGTTCTACATGAGAGGAATCCACCATCATCCTTGGCATGGAGTGTTCGCTATAAGATAGCTACTGTCACTGTTTAG 2481 0.3978 MKYFLLMLCFSTFLCAVSALSPDGVSLLSLSRHWTSVPPSIDSSWNASDSTPCSWVGIQCNSADNVITLNLTSFSISGQLGSEIAHLTHLKTLVFYSNTLSGRIPSEISNCTMLAYLDLSQNNFSGEIPNALSNCSMLEHLDLSENSLSGQIPNSLKNLQNLQYFNLYSNLLSGEIPEYLFEFPELELVFLENNSLSGPIPMNVGNATKLLGLYLYSNQLSGRIPPSIGNCSKLEKLFLGDNQLRGTLPQSLNNLQNLVSLNVKQNNLQGTIPLGSGNCKNLSFLDLSYNVFSGGIPSGLGNCSGLTEFDAMNSNLGGSIPSSLGQLSSLVTLELGNNKLTGHIPPNLCVGKKLKFLVMGFNQLEGSIPLDLGGCTSLTRLILKANNLTGALPNFESNMNLEYMDISNNSISGAIPSSLGNCKNLTKINLSVNKLVGLIPSELGNLVNLRNLILSNNNLEGPLPPLLSNCHQMEDFDVGFNFLNGSFPSSLSNWTGLSTLVLRENHFSGGIPTFLSEFKKLIELQLGGNVLGGEIPGSIGTLQNLLYGLNFSANGLTGEVPSEIGKLTMLLRLDLSLNNLSGSIKILEQLPSLVDVNISFNSFVGAVPDTLMKLLSSSPSSFLGNPGLCVSCSISDSLNCPKNVSLNPCGYLSGHHKGLSKIKIIIISLGSSFFVILLFLGIIFMLLLRRGFEQDVKILPEHGSNSFLNKVMQVTENLNDRYIIGRGAHGVVYIVSLDPINVFAVKKFPFANKEGQSKSMSRELESLWKIKHRNLVKLKSFWLRKDYGLILYNYMQNGSLHDVLHERNPPSSLAWSVRYKIATVTV 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0472 826 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Bisa12g0472 826 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 152 275 - -
Bisa12g0472 826 Gene3D Ribonuclease Inhibitor 351 636 IPR032675 -
Bisa12g0472 826 Gene3D Ribonuclease Inhibitor 273 348 IPR032675 -
Bisa12g0472 826 FunFam Leucine-rich repeat receptor-like protein kinase TDR 60 349 - -
Bisa12g0472 826 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Bisa12g0472 826 SMART LRR_typ_2 87 111 IPR003591 -
Bisa12g0472 826 SMART LRR_typ_2 255 279 IPR003591 -
Bisa12g0472 826 SMART LRR_typ_2 159 183 IPR003591 -
Bisa12g0472 826 SMART LRR_typ_2 446 470 IPR003591 -
Bisa12g0472 826 SMART LRR_typ_2 327 351 IPR003591 -
Bisa12g0472 826 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 352 638 - -
Bisa12g0472 826 Gene3D Ribonuclease Inhibitor 176 272 IPR032675 -
Bisa12g0472 826 SUPERFAMILY Protein kinase-like (PK-like) 710 822 IPR011009 -
Bisa12g0472 826 ProSiteProfiles Protein kinase domain profile. 718 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0472 826 Pfam Leucine Rich Repeat 116 135 IPR001611 GO:0005515
Bisa12g0472 826 Pfam Leucine Rich Repeat 138 159 IPR001611 GO:0005515
Bisa12g0472 826 Gene3D Transferase(Phosphotransferase) domain 1 704 826 - -
Bisa12g0472 826 SUPERFAMILY L domain-like 21 293 - -
Bisa12g0472 826 Pfam Protein kinase domain 723 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0472 826 Gene3D Ribonuclease Inhibitor 23 175 IPR032675 -
Bisa12g0472 826 SUPERFAMILY RNI-like 296 620 - -
Bisa12g0472 826 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0472 Bisa-ChrBisa12 7048834 7052353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0472 11 822 Receptor kinase-like Gene Family AT1G73080 44.044 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa12g0472 Pkinase 5.2e-11 CL0016