Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0455 ATGGAGTTAGGGATGTCAAGCTCCAAACATGTCTCTGTTTTCTTCTTTGTGTTTCTGGTTTTGAGTTTCTTCACAGAGTTTGGATCACCCGCTCAACTTATCCCACAAGATGAAGTGAGAGTTCTACAAGCAATATCTGATCAACTGCGGAATGTGAACTGGAAAATACTCAAGTTCTTCTGTTTTGCTCCAATGCGTCCTATATTATTTGCCATGTATTGTGTGTTTGATATGATTGATGTATATTCGTATAGGTCCCTTTTTGGGAATCGAATTAGTGGATCAATTCCCATGGAATTGGGTGATATTGCTACTCTGGAGCGACTGTACCTAGAAGATAATCAACTTGTAGGAACTCTTCCTCCGAGCCTCGGAAAATTGAGCAACTTACAGAATTTATGGCTTTCTGCAAATAATTTCACAGGGACAATACCAGAAACATTTGGCAATCTAATAAACCTAACAGAGTTTACGATAGATGGGAGCACCTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGACCAAAATGCAGATTCTGAATATGCAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCTAGGTTGACAGAGTTGAGTAAACTGAGAATATCAGACTTGAATGGAGCAGCGATAATGGCATTTCCTAATTTGACGGGTTTGAATTATTATTTCGATGAATTGATATTGAGAAATTGCTTTATTACTGGTCCCATTCCAGATTACATTGGTAACATAACGTACTTAACGACTCTAGACCTGAGCTTCAACAGGTTGACTGGATCAATCCCCAAATCATTTGAAGACTTGGAATATTTAAATTACATGGATTTATCTTACAACAATTTTACAAAAGCTTCTGCAACTAATTGTCAGCTCTTGGATGTGAACTTGGCTTCTAGCCTCTCTTCTTCAGCAAATAATTCACTCTTTTGTTTGAAGAAGGACCTACCATGTATAGGAAAACCCCAGTATTATTCTTTGTTCATAAACTGTGGAGGATCCAAGATGGAAGTTGAAGGGAATGAATATGAAGAAGATCTCAACCAAGAAGGAATTTCATACTTTGATCAGAGAGATACATGGGCTTATAGCAGCACTGGAGGATTTAGATACTTAAAAGATTTTAACATTGCGAAGGAAGCTGGTGGAGTTGGCAAGGCCATCACCAAGGAATTTGATGTTGATGTTAACGATACCACATTGGAGATCCATTTATACTGGGCCGGGAAAGGAACTACTGCCGTTCCTACCTATGGTGTATATGGTCCTCTTATATCTGCTATCACAGTGACCCCAACAAGGGGATTAGCTTATCTTCACGAGGAGTCAAGGTTGAAAATAGTACACAGGGACATTAAGGCAACAAATGTCTTACTTGATAAAAATCTTAATGCCAAAATTTCTGACTTTGGTTTAGCAAAGCTCGATGAAGAAGAAAATACCCATATCAGCACACGAATAGCTGGGACAATTGGTTACATGGCTCCTAAATATGCTATGCGAGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTAGAGATTGTAAGCGGAAAGAGCAATATGAATTACAGGCCAAAGGATGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTACAAGAGCAAGGAAACCTTTTGGAACTGGTTGATTTAAGTCTTGGTTTGAGCTACTCCGAAGAGGAGGCCATGAGAATGCTGAACTTGGCACTCTTGTGCACCAACCCATCTCCCACTCTTAGACCATCCATGTCATCTGTAGTGAGGATGCTTGAAGGAAAAACTCCGATTCAAGCACCAATAATCAAGCGCAAAGATTCAAGCCAGGATCAGGATGCAAGGTTCAAAGCCTTTGAGATTGTAGCACATGATAGCCAAACACTAGTTTCTTCTAAATTCTCTCAAGAAAGTATAGAGCGAAGAAGCAAGTCAATGGATGGACCATGGGTTGACTCTTCAAGATCTGTTCTAAGTAGGGATGATGATTCTTCATCTCGAAGGCTTCTTCGAGATTAA 2043 0.397 MELGMSSSKHVSVFFFVFLVLSFFTEFGSPAQLIPQDEVRVLQAISDQLRNVNWKILKFFCFAPMRPILFAMYCVFDMIDVYSYRSLFGNRISGSIPMELGDIATLERLYLEDNQLVGTLPPSLGKLSNLQNLWLSANNFTGTIPETFGNLINLTEFTIDGSTLSGKIPSFIGNWTKMQILNMQGTGMEGPIPSTISRLTELSKLRISDLNGAAIMAFPNLTGLNYYFDELILRNCFITGPIPDYIGNITYLTTLDLSFNRLTGSIPKSFEDLEYLNYMDLSYNNFTKASATNCQLLDVNLASSLSSSANNSLFCLKKDLPCIGKPQYYSLFINCGGSKMEVEGNEYEEDLNQEGISYFDQRDTWAYSSTGGFRYLKDFNIAKEAGGVGKAITKEFDVDVNDTTLEIHLYWAGKGTTAVPTYGVYGPLISAITVTPTRGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPKYAMRGYLTDKADVYSFGVVALEIVSGKSNMNYRPKDEFVYLLDWAYVLQEQGNLLELVDLSLGLSYSEEEAMRMLNLALLCTNPSPTLRPSMSSVVRMLEGKTPIQAPIIKRKDSSQDQDARFKAFEIVAHDSQTLVSSKFSQESIERRSKSMDGPWVDSSRSVLSRDDDSSSRRLLRD 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0455 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Bisa12g0455 680 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 121 213 - -
Bisa12g0455 680 Pfam Leucine rich repeat 251 287 IPR001611 GO:0005515
Bisa12g0455 680 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515
Bisa12g0455 680 SUPERFAMILY Protein kinase-like (PK-like) 437 612 IPR011009 -
Bisa12g0455 680 Gene3D Ribonuclease Inhibitor 83 322 IPR032675 -
Bisa12g0455 680 FunFam Putative LRR receptor-like serine/threonine-protein kinase 427 612 - -
Bisa12g0455 680 SUPERFAMILY L domain-like 87 291 - -
Bisa12g0455 680 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 437 634 - -
Bisa12g0455 680 Pfam Malectin domain 373 432 IPR021720 -
Bisa12g0455 680 Gene3D Transferase(Phosphotransferase) domain 1 434 628 - -
Bisa12g0455 680 SMART serkin_6 375 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0455 680 MobiDBLite consensus disorder prediction 664 680 - -
Bisa12g0455 680 Gene3D - 368 433 - -
Bisa12g0455 680 MobiDBLite consensus disorder prediction 642 680 - -
Bisa12g0455 680 Pfam Protein kinase domain 435 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0455 680 ProSiteProfiles Protein kinase domain profile. 299 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0455 Bisa-ChrBisa12 6769579 6779660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0455 432 669 Receptor kinase-like Gene Family AT1G53440 73.640 1.64e-110 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0455 Pkinase 2.2e-23 CL0016