Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0453 ATGGAGTTAGGGATGTCAAGCTCCAAACATGTCTCTGTTTTCTTCTTGGGGTTTCTGGTTTTGAGTTCCTTCACAGAGTTTGGATCACACGCTCAACTTATCCCACAAGATGAAGTGAGAGCTCTACAAGCAATATCTGATAAACTGCAGAATGTGAATTGGAAAGTCACTCAACGTTCATGCAATGGAGATGCAGGATTTCATAACAACACCCCTATATCCTCTCCTACTTCAACCGCTCTTATCGTCAGGAATGTTACTTGCAATTGCACTTTCCAAAACCGAGCCGTTTGCCACGTTACCAACATTTTGCTAAGAGGTCAGAATATTTCTGGAGTTATTCCCAATGAATTTGGAAATCTCACTCAACTCACAGAACTTGATCTCACTCGCAACTATCTCAGTGGCTCAATTCCAACGATTTTTACGCGCATTCCTCTTGTTACTCTGTCCCTTTTGGGGAATCAGATTAGTGGTTCAATTCCTGTGGAATTGGGTGATATTGCTACTCTGGAGGAATTGATTCTAGAAGATAATCAGCTTATAGGAACTCTTCCTTCGAGCCTTGGAAATTTGAGCAACTTACGGAGATTACTTCTTTCTGCAAATAATTTCACAGGGACAATACCAGAAACATTTGGCAATCTAAAGAACCTAACTGATTTGATAGATGGGAGCACCTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGACCAAAATGGAGATTCTGAATATGCAGGGCACTGGCATGGAAGGCCCAATTCCTTCCACCATATCTAGGTTGACAAATTTGACTGAACTGAGAATATCGGATTTGAATGGAACAACAACAATGACATTTCCTAATTTGACGGGTTTGAAAAGTTTGGAACGATTGATATTGAGAAATTGCTTTATTACTGGTCCCATTCCAGATTACATGGGTGAAATAACAAACTTAAAGACTCTAGACCTGAGCTTCAACAGGTTGACTGGATCAATCCCCAATTCATTTGAAGACTTGCAAAGTATAAATCACATGTTTTTAACTAACAACTCTTTGAGTGGATCAATTCCGGGATGGATATTGAGCAACAAACAGAATATTGATTTATCTTACAACAATTTTACAGAAGCTTCTGCAACTAATTGCCAGCTCTCGGATGTAAACTTGGCTTCTAGCCTCACATCCTCAGCAAGCAATTCACTCTCTTGTTTGAAGAAGGACCTACCATGTGCAGGAAAACCCCAGTATTATTCTTTGTTCATAAACTGTGGAGGATCTGATATGGAAGTTGAGGGGAATGAATATGAAGCAGATCTCAACCAAGAAGGCATTTCATACTTTGATCAAAGAAATAAATGGGCTTATAGCAGCACAGGAGTATATATGAATAATGATAAAGCTAATTTTGTAGCAACAAATACATTTTCTTTGAATGTTAATGGCTCAGCATACTACCAAACAGCCCGCCTTAGCCCTTTGTCACTCAAGTATTATGGCCTTTGTATGTTAAGGGGTAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTATTCTGATGACCAGACATTTAGCAGTCTTGGTATGCGCATATTTGACGTTTCAATTCAGGGTTTTAGATACTTAAAAGATTTTAACATTGCGAAGGAAGCTGGTGGAGTTGGTAAGGGCATCACCAAAGAATTTGATGTTTATGTTAATGATACCACATTGGAGATCCATTTATACTGGGCAGGGAAAGGAACTACTGCTATTCCTGACAGAGGTGTATATGGACCTCTTATATCTGCTATCACAGTGACCCCAAACTTCAAGATTCCTTCCGAAGGGCTGTCTGCTGGAGCTATCGTTGGAATCGTGGCTGGATCATGTATTTTTGTCATATTGATACTAATTGTCCTTAGAAAGAAGGGTTTCCTTGGTGGCAAAGATCCAATTGACAAAGAACTTTTAGAGCTAAAAACAGGTTATTTCTCCTTAAGACAAATTAAAGCTGCCACTAATAACTTCGACTCAGCAAATAAGATAGGGGAAGGAGGCTTTGGGCCTGTTTACAAGGGTGTACTATCAGATGGTATTGTCATTGCTGTTAAGCAGCTCTCTTCCAAATCAAAGCAAGGAAATCGTGAATTCGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCGAATCTTGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAATTGTTACTAATATATGAATACATGGAGAACAATAGTCTTGCTCGAGCACTTTTTGGTCGTGAAGATCAAAGGCTACATCTGGATTGGCCCTTAAGGATGAAGATTTGTGTGGGGATAGCAAGGGGATTAGCTTATCTTCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGACATCAAGGCAACAAATGTCTTACTTGATAAAAATCTCAATGCCAAAATCTCTGACTTTGGTTTAGCAAAGCTCGATGAAGAAGAAAATACTCATATCAGCACACGGATAGCTGGAACAATTGGTTACATGGCTCCGGAATATGCTATGCGAGGTTACTTAACGGACAAAGCAGATGTTTATAGCTTCGGAGTTGTTGCTTTGGAGATTGTAAGCGGAAAGAGCAACACGAATTACAAGCCAAAGGACGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTACAAGAGCAAGGAAACCTTCTGGATCTGGTGGATCCAAGTCTTGGTTCGAGCTACTCCAAAGATGAGGCCATGAGAATGCTGAACTTGGCACTCTTGTGCACCAACCCATCTCCCACTCTTAGACCATCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAACTCCTATTCAAGCACCGATAATCAAGTTCAAAGATTCAAGCCAAAATCAGGATGCAAGGTTCAAAGCCTTTGAGATGCTAACACATGATAGCCAAACCCTGGTTTCTTCTAACTTCTCTCAAGAAAGTATGGAGCAAAGAAGCAAGTCAATGGAGGGACCATGGGTTGACTCCTCAATATCTCTTCCAAGTAGAGGTGATGATTCTTCATCTAGAAAGCTTCTTCGAGATTAA 3057 0.3994 MELGMSSSKHVSVFFLGFLVLSSFTEFGSHAQLIPQDEVRALQAISDKLQNVNWKVTQRSCNGDAGFHNNTPISSPTSTALIVRNVTCNCTFQNRAVCHVTNILLRGQNISGVIPNEFGNLTQLTELDLTRNYLSGSIPTIFTRIPLVTLSLLGNQISGSIPVELGDIATLEELILEDNQLIGTLPSSLGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDLIDGSTLSGKIPSFIGNWTKMEILNMQGTGMEGPIPSTISRLTNLTELRISDLNGTTTMTFPNLTGLKSLERLILRNCFITGPIPDYMGEITNLKTLDLSFNRLTGSIPNSFEDLQSINHMFLTNNSLSGSIPGWILSNKQNIDLSYNNFTEASATNCQLSDVNLASSLTSSASNSLSCLKKDLPCAGKPQYYSLFINCGGSDMEVEGNEYEADLNQEGISYFDQRNKWAYSSTGVYMNNDKANFVATNTFSLNVNGSAYYQTARLSPLSLKYYGLCMLRGNYKVKLHFAEIMYSDDQTFSSLGMRIFDVSIQGFRYLKDFNIAKEAGGVGKGITKEFDVYVNDTTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKIPSEGLSAGAIVGIVAGSCIFVILILIVLRKKGFLGGKDPIDKELLELKTGYFSLRQIKAATNNFDSANKIGEGGFGPVYKGVLSDGIVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGREDQRLHLDWPLRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYKPKDEFVYLLDWAYVLQEQGNLLDLVDPSLGSSYSKDEAMRMLNLALLCTNPSPTLRPSMSSVVSMLEGKTPIQAPIIKFKDSSQNQDARFKAFEMLTHDSQTLVSSNFSQESMEQRSKSMEGPWVDSSISLPSRGDDSSSRKLLRD 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0453 1018 Gene3D Ribonuclease Inhibitor 39 171 IPR032675 -
Bisa12g0453 1018 Gene3D - 412 600 - -
Bisa12g0453 1018 CDD STKc_IRAK 673 940 - -
Bisa12g0453 1018 SMART LRR_typ_2 192 215 IPR003591 -
Bisa12g0453 1018 SMART LRR_typ_2 312 335 IPR003591 -
Bisa12g0453 1018 SMART LRR_typ_2 121 144 IPR003591 -
Bisa12g0453 1018 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Bisa12g0453 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 413 600 - -
Bisa12g0453 1018 Gene3D Ribonuclease Inhibitor 176 277 IPR032675 -
Bisa12g0453 1018 Gene3D Ribonuclease Inhibitor 278 395 IPR032675 -
Bisa12g0453 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Bisa12g0453 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 282 374 - -
Bisa12g0453 1018 MobiDBLite consensus disorder prediction 977 1009 - -
Bisa12g0453 1018 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Bisa12g0453 1018 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 742 - -
Bisa12g0453 1018 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0453 1018 SUPERFAMILY L domain-like 76 381 - -
Bisa12g0453 1018 MobiDBLite consensus disorder prediction 977 1018 - -
Bisa12g0453 1018 Pfam Protein tyrosine and serine/threonine kinase 670 937 IPR001245 GO:0004672|GO:0006468
Bisa12g0453 1018 Gene3D Phosphorylase Kinase; domain 1 639 742 - -
Bisa12g0453 1018 SUPERFAMILY Protein kinase-like (PK-like) 652 958 IPR011009 -
Bisa12g0453 1018 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 35 275 - -
Bisa12g0453 1018 Gene3D Transferase(Phosphotransferase) domain 1 743 958 - -
Bisa12g0453 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 977 - -
Bisa12g0453 1018 ProSiteProfiles Leucine-rich repeat profile. 314 337 IPR001611 GO:0005515
Bisa12g0453 1018 SMART serkin_6 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0453 1018 Pfam Malectin domain 415 595 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0453 Bisa-ChrBisa12 6728165 6738130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0453 27 1006 Receptor kinase-like Gene Family AT1G53440 63.004 0.0 1254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa12g0453 PK_Tyr_Ser-Thr 2.3e-50 CL0016